Shigella sonnei Ss046: SSON_4398
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Entry
SSON_4398 CDS
T00274
Symbol
cpdB
Name
(GenBank) 2':3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
ssn
Shigella sonnei Ss046
Pathway
ssn00230
Purine metabolism
ssn00240
Pyrimidine metabolism
ssn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
SSON_4398 (cpdB)
00240 Pyrimidine metabolism
SSON_4398 (cpdB)
Enzymes [BR:
ssn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
SSON_4398 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
SSON_4398 (cpdB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
DUF7436
Motif
Other DBs
NCBI-ProteinID:
AAZ90878
ShiBASE_China:
SSO4398
UniProt:
Q3YUD4
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All DBs
Position
complement(4661629..4663572)
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AA seq
647 aa
AA seq
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MIKFSATLLATLIAASVNAATVDLRIMETTDLHSNMMDFDYYKDTATEKFGLVRTASLIN
DARNEVKNSVLVDNGDLIQGSPLADYMSAKGLKTGDVHPVYKALNTLDYTVGTLGNHEFN
YGLDYLKNALAGAKFPYVNANVIDARTKQPMFTPYLIKDTEVVDKDGKKQTLKIGYIGVV
PPQIMGWDKANLSGKVTVNDITETVRKYVPEMREKGADVVVVLAHSGLSADPYKVMAENS
VYYLSEIPGVNAIMFGHAHAVFPGKDFADIEGADITKGTLNGVPAVMPGMWGDHLGVVDL
QLSNDSGKWQVTQAKAEARPIYDIANKKSLAAEDSKLVETLKADHDATRQFVSKPIGKSA
DNMYSYLALVQDDPTVQVVNNAQKAYVEHYIQGDPDLAKLPVLSAAAPFKVGGRKNDPAS
YVEVEKGQLTFRNAADLYLYPNTLIVVKASGKEVKEWLECSAGQFNQIDPNSTKPQSLIN
WDGFRTYNFDVIDGVNYQIDVTQPARYDGECQMINTNAERIKNLTFNGKPIDPNAMFLVA
TNNYRAYGGKFAGTGDSHIAFASPDENRSVLAAWIADESKRAGEIHPAADNNWRLAPIAA
DKKLDIRFETSPSDKAAAFIKEKGQYPMNKVATDDIGFAIYQVDLSK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgattaagtttagcgcaacgctcctggccacgctgattgccgccagtgtgaatgcagcg
acggtcgatctgcgtatcatggaaaccactgatctgcatagcaacatgatggatttcgat
tattacaaagacaccgccacggaaaaattcggactggtacgtacggcaagcctgattaac
gatgcccgcaatgaagtgaaaaacagcgtactggtcgataacggcgatttgattcagggg
agtccgctggcagattacatgtcggcgaaaggattaaaaacaggtgatgttcatccggtt
tataaggcgctgaatacgctggattatacggtcggtacactcggcaatcatgaatttaac
tacggtctggattacctgaaaaatgcgctggcgggagcgaaattcccttatgtaaatgcc
aacgtcattgacgccagaaccaaacagccaatgtttacaccgtatttaattaaagatacc
gaagtggtcgataaagacggaaaaaaacagacgctgaagattggctatattggcgtcgtg
ccgccgcaaatcatgggctgggataaagctaatttatccgggaaagtgacggtgaatgat
attaccgaaaccgtgcgcaaatacgtgcctgaaatgcgcgagaaaggtgccgatgtcgtt
gtcgttctggcacattccgggctgtctgccgatccgtataaagtgatggcggaaaactca
gtttattacctcagtgaaattccgggcgttaacgccattatgtttggtcatgctcacgcc
gttttcccgggtaaagattttgctgatatcgaaggggctgatatcaccaaaggcacgctg
aatggtgttccggcggtaatgccgggcatgtggggcgatcatcttggggtggtcgactta
caactcagtaatgacagcggtaaatggcaggtgacgcaggcgaaagcggaagctcggccg
atttacgacatcgccaataaaaaatccctcgcggcggaagacagcaagctggtagaaaca
ctcaaagccgatcacgatgccacacgccagttcgtcagcaagccaatcggtaaatctgcc
gacaatatgtatagctatctggcgctggtgcaggacgatccgaccgtgcaagtcgtgaac
aacgcgcaaaaagcgtatgtcgaacattacattcagggcgatccggatctggcaaaactg
ccggtgctttcagctgccgcaccgtttaaagttggtggtcgcaaaaatgacccggcaagc
tatgtggaggtggaaaaaggccagttgaccttccgtaatgccgccgatctttatctctac
cccaatacgctgattgtagtgaaagccagcggtaaagaggtgaaagagtggctggagtgc
tccgccggacagtttaaccagattgatcctaacagcacgaaaccacagtcactcatcaac
tgggatggtttccgcacttataactttgatgttattgatggtgtgaattatcagattgat
gttacccagcccgcccgttatgacggcgagtgccagatgattaataccaatgcggaaagg
attaagaacctgacctttaatggcaagccgattgatccgaacgccatgttcctcgttgcc
accaataactatcgcgcttacggcggcaaatttgccggtacgggcgacagccatatcgct
tttgcttcaccggatgagaaccgctcggtgctggcagcgtggattgctgatgagtcgaaa
cgtgcgggggaaattcacccggcggcagataacaactggcgtttagcaccgatagctgcc
gataagaaactggatatccgtttcgaaacttccccgtcagataaagccgcagcgtttatt
aaagagaaagggcagtatccgatgaataaagtcgcgaccgatgatatcgggtttgcgatt
tatcaggtggatttgagtaagtaa
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