Shigella sonnei Ss046: SSON_4410
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Entry
SSON_4410 CDS
T00274
Symbol
ytfR
Name
(GenBank) putative ATP-binding component of a transport system
KO
K10820
galactofuranose transport system ATP-binding protein [EC:
7.5.2.9
]
Organism
ssn
Shigella sonnei Ss046
Pathway
ssn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SSON_4410 (ytfR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssn02000
]
SSON_4410 (ytfR)
Enzymes [BR:
ssn01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.9 ABC-type D-galactofuranose transporter
SSON_4410 (ytfR)
Transporters [BR:
ssn02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Galactofuranose transporter
SSON_4410 (ytfR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC_ATPase
SMC_N
AAA_29
AAA_16
AAA_23
AAA_22
RsgA_GTPase
TsaE
AAA_30
BTBD16_C
MMR_HSR1
nSTAND_NTPase5
DUF2813
AAA_15
DLIC
AAA_27
DUF815
Motif
Other DBs
NCBI-ProteinID:
AAZ90890
ShiBASE_China:
SSO4410
UniProt:
Q3YUC2
LinkDB
All DBs
Position
4677558..4679060
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AA seq
500 aa
AA seq
DB search
MTTDQHQEILRTEGLSKFFPGVKALDNVDFSLRRGEIMALLGENGAGKSTLIKALTGVYH
ADRGTIWLEGQAISPKNTAHAQQLGIGTVYQEVNLLPNMSVADNLFIGREPKRFGLLRRK
EMEKRATELMASYGFFLDVREPLNRFSVAMQQIVAICRAIDLSAKVLILDEPTASLDTQE
VELLFGLMRQLRDRGVSLIFVTHFLDQVYQVSDRITVLRNGSFVGCRETRELPQIELVKM
MLGRELDTHVLQRAGRTLLSDKPVAAFKNYGKKGTIAPFDLEVRPGEIVGLAGLLGSGRT
ETAEVIFGIKPADSGTALIKGKPQTLRSPHQASVLGIGFCPEDRKTDGIIAAASVRENII
LALQAQRGWLRPISRKEQQEIAERFIRQLGIRTPSTEQPIEFLSGGNQQKVLLSRWLLTR
PQFLILDEPTRGIDVGAHAEIIRLIETLCADGLALLVISSELEELVGYADRVIIMRDRKQ
VAEIPLAQLSVPAIMNAIAA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgaccaacaccaggagatcctccgcaccgaaggattaagtaaatttttcccc
ggcgtcaaagcgttagacaacgttgatttcagcctgcgccgtggcgaaatcatggcgctg
cttggtgaaaacggggcgggaaaatcaacgctaatcaaagcattaactggtgtataccac
gccgatcgcggcaccatctggctggaaggccaggctatctcaccgaaaaataccgcccat
gcacaacaactcggtattggcaccgtctatcaggaagtcaacctgctacccaatatgtcg
gttgctgataatctattcataggtcgcgaacccaaacgtttcggccttctacgccgtaaa
gagatggaaaagcgcgccaccgaactgatggcatcttacggtttcttcctcgacgtgcgc
gaaccgcttaaccgcttttcagtcgcgatgcagcaaatcgtcgccatttgccgggctatc
gatctctccgccaaagtgctgatcctcgatgaacccaccgccagcctcgacacccaggaa
gtggagctattatttggcctgatgcgtcagttgcgcgatcgcggcgtcagcctgatcttt
gtcactcactttctcgatcaggtctatcaggtcagcgatcggatcactgtcttacgcaac
ggcagtttcgtaggctgtcgggaaacgcgcgagctaccgcagatcgaactggtaaaaatg
atgctggggcgcgagctggatacccacgtgctacagcgtgccgggcgaacattgttgagc
gacaaacccgttgccgcgttcaaaaattacggcaaaaaaggaacgatagcaccgtttgat
ctcgaagtgcgccccggcgagatcgtcggtctggctggcttgctgggatccggacgtacc
gaaaccgccgaagtgatcttcggtatcaaacctgctgacagcggcacggcgttgatcaaa
ggcaaaccgcaaaccctgcgatcgccacatcaggcttcagtactgggcatcggattctgc
ccggaagacaggaaaaccgatggcatcatcgccgccgcctcggtgcgggaaaatatcatc
ctcgctctccaggcccagcgcggctggctacgacccatttcccgcaaagagcagcaagag
attgccgaacgctttatccgccagcttggcattcgcacaccttcaactgaacaaccgatt
gaatttctctccggtggcaatcagcaaaaagtgctgctttcacgttggctactgacccga
ccgcaatttctgatccttgatgagccaacccgtggcattgatgttggtgcccacgccgag
atcatccgcctgattgaaacgctgtgtgctgacggtctggcgctgctggtgatctcctcc
gaactggaagagctggtgggctatgccgaccgggtgatcatcatgcgcgatcgcaaacag
gtggcggagatcccgctggcacagctttccgttccggcgatcatgaacgccattgcggcg
taa
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