Shigella sonnei Ss046: SSON_4448
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Entry
SSON_4448 CDS
T00274
Symbol
yjgR
Name
(GenBank) conserved hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
ssn
Shigella sonnei Ss046
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssn03400
]
SSON_4448 (yjgR)
DNA repair and recombination proteins [BR:
ssn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
SSON_4448 (yjgR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA_10
TrwB_AAD_bind
ResIII
AAA_16
FtsK_SpoIIIE
SLFN-g3_helicase
AAA_30
T2SSE
AAA
AAA_7
AAA_19
Hydrolase
CbiA
SRP54
AAA_18
NTPase_1
AAA_28
ORC-CDC6-like
nSTAND3
AAA_25
AAA_6
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
AAZ90926
ShiBASE_China:
SSO4448
UniProt:
Q3YU86
LinkDB
All DBs
Position
complement(4719045..4720547)
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AA seq
500 aa
AA seq
DB search
MSEPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVK
GDLTGIAQAGTASEKLLARLKNIGVNDWQPHANPVVVWDIFGEKGHPVRATVSDLGPLLL
ARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASV
GAIQRGLLSLEQQGAEHFFGEPMLDIKDWMRTDANGKGVINILSAEKLYQMPKLYAASLL
WMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFV
SQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRANPAFDTEKAIQELGTGE
ALISFLDAKGSPSVVERAMVIAPCSRMGPVTEDERNGLINHSPVYGKYEDEVDRESAYEM
LQKGFQASTEQQNNPPVKGKEVAVDDGILGGLKDILFGTTGPRGGKKDGVVQTMAKSAAR
QVTNQIVRGMLGSLLGGRKR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacccctgttaattgcccgcacgccggacacagaactgtttttactgccggga
atggctaaccgtcacgggctgattactggcgcaacggggacgggtaaaactgtcacgttg
caaaaactggcagagtcattgtcggaaatcggtgttccggtgtttatggccgatgtgaaa
ggcgatctgaccggcatcgcgcaggcaggaacggcgtcggaaaaactgctcgcaagactg
aaaaatatcggcgtcaacgactggcaaccgcatgccaatccggtggtggtgtgggatatc
tttggcgagaaaggccatccggtgcgggcgacggtttcggatctggggccgctgttgctg
gcacgactgttgaatctcaacgatgtgcaatctggcgtgctgaatattatcttccgcatt
gcggacgatcagggattgttgctgctcgactttaaagatttgcgggcgattacccagtac
atcggcgataacgccaaatccttccagaatcagtacggaaatatcagtagcgcatcggtt
ggtgccatccagcgcggattactgtcgctggaacagcaaggcgcagaacacttctttggt
gagccgatgctggatatcaaagactggatgcgcaccgatgccaacggtaaaggcgttatc
aatatcctcagcgccgagaaactttatcagatgccgaaactgtacgccgccagcctgctg
tggatgctttcagagttatatgaacaattgcctgaagcgggcgatctggagaaaccaaaa
ctggtgtttttcttcgacgaagcacatctgctgtttaacgatgcgccacaggtactgctg
gataagattgagcaggtgataaggcttattcgctcaaaaggcgtgggcgtctggttcgtt
tcgcaaaacccgtcagatatcccggataacgtgctagggcagctcggtaatcgcgttcaa
cacgctttgcgtgcttttacgcctaaagatcagaaagcagtgaaggcagcggcgcaaacc
atgcgggccaatccggcgtttgataccgaaaaggcaatccaggaactggggaccggcgag
gcgttaatctcgtttctcgatgcgaaaggaagtccttcagtggtggaacgggcgatggtg
atcgcaccttgttcgcgaatggggccggtgacggaagatgagcgtaatggcctgattaat
cactccccggtgtatggcaaatatgaagatgaggtggaccgcgagtccgcctatgagatg
ctgcaaaaaggctttcaggccagtaccgagcagcaaaataatccccccgtgaaagggaaa
gaggtggcggtggatgacggtattcttggtggattgaaggatattttgtttggcactacc
ggaccacgcggcgggaagaaagatggtgtggtgcaaacaatggcgaaaagcgccgctcgc
caggtgacgaatcagattgtacgcgggatgttggggagtttgctgggggggagaaaaagg
taa
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