Saccharolobus solfataricus P2: SSO0179
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Entry
SSO0179 CDS
T00054
Symbol
rad2
Name
(GenBank) DNA repair endo/exonuclease FEN-1 (RAD2) (rad2)
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
sso
Saccharolobus solfataricus P2
Pathway
sso03030
DNA replication
sso03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SSO0179 (rad2)
03410 Base excision repair
SSO0179 (rad2)
03450 Non-homologous end-joining
SSO0179 (rad2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sso03032
]
SSO0179 (rad2)
03400 DNA repair and recombination proteins [BR:
sso03400
]
SSO0179 (rad2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sso04147
]
SSO0179 (rad2)
DNA replication proteins [BR:
sso03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
SSO0179 (rad2)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
SSO0179 (rad2)
DNA repair and recombination proteins [BR:
sso03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
SSO0179 (rad2)
Exosome [BR:
sso04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SSO0179 (rad2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
PEP-utilisers_N
DUF2458
HHH_5
Ribosomal_S13
PIN_2
Motif
Other DBs
NCBI-ProteinID:
AAK40525
UniProt:
Q980U8
Structure
PDB
PDBj
LinkDB
All DBs
Position
150044..150952
Genome browser
AA seq
302 aa
AA seq
DB search
MDSQGRVTSHLSGLFYRTINILEEGVIPIYVFDGKPPEQKSEELERRRKAKEEAERKLER
AKSEGKIEELRKYSQAILRLSNIMVEESKKLLRAMGIPIVQAPSEGEAEAAYLNKLGLSW
AAASQDYDAILFGAKRLVRNLTITGKRKLPNKDVYVEIKPELIETEILLKKLGITREQLI
DIGILIGTDYNPDGIRGIGPERALKIIKKYGKIEKAMEYGEISKKDINFNIDEIRGLFLN
PQVVKPEEALDLNEPNGEDIINILVYEHNFSEERVKNGIERLTKAIKEAKGASRQTGLDR
WF
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggattcacaggggagagtaactagtcatctaagtggattattttatagaacgataaat
atcctagaagaaggtgtcataccaatctacgtctttgatggtaaaccgccagagcaaaaa
agtgaagagttagaaagaaggagaaaggcaaaagaagaagctgagagaaagttagaaaga
gccaaaagcgaagggaagatagaggagctaaggaaatattcacaagctatacttagatta
tcaaatatcatggtagaagaaagtaaaaaattgttgagagctatgggaatacctatagtt
caagcaccttctgaaggagaggctgaggctgcatatctgaataaattaggattaagctgg
gcagcagcaagtcaagattatgatgcgatacttttcggagctaaaaggctagtaagaaat
ttgacaattacagggaaaagaaagcttcctaacaaggacgtatatgtggagataaaacca
gaattaatagaaacggaaatcttacttaaaaaattaggaataacaagggaacaactaatt
gatataggcatattaattggaacagactataatcctgatggaataaggggcataggacca
gaaagagcactaaagataataaaaaaatacggcaagatagaaaaagcaatggaatatggt
gaaatttcaaaaaaggatattaatttcaatatcgatgaaattagaggtttatttttgaat
ccacaagtagttaaaccagaggaagctttagatttgaatgaacctaacggagaagatata
attaatatcttagtatatgaacataacttcagtgaagaaagagtgaagaatggaattgaa
agattaactaaagcaataaaagaagctaaaggagcgtctagacaaacaggattggacaga
tggttttaa
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