Saccharolobus solfataricus P2: SSO0225
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Entry
SSO0225 CDS
T00054
Symbol
rpoA1
Name
(GenBank) DNA-directed RNA polymerase, subunit A' (rpoA1)
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
sso
Saccharolobus solfataricus P2
Pathway
sso03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sso00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SSO0225 (rpoA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sso03021
]
SSO0225 (rpoA1)
Enzymes [BR:
sso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SSO0225 (rpoA1)
Transcription machinery [BR:
sso03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
SSO0225 (rpoA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
AAK40566
UniProt:
Q980R2
Structure
PDB
LinkDB
All DBs
Position
complement(190547..193189)
Genome browser
AA seq
880 aa
AA seq
DB search
MSEKNIKGIKFGILSPDEIRKMSVTAIITPDVYDEDGTPIEGSVMDPRLGVIEPGQKCPT
CGNTLGNCPGHFGHIELVRPVIHVGLVKHIYEFLKATCRRCGRVKISEDEIEKYSRIYNA
IKKRWPSAARRLTEYVKKTAMKAQVCPHCNEKQYKIKLEKPYNFYEERKEGVAKLTPSDI
RERLEKIPDSDVEILGYDPTTSRPEWMILTVLPVPPITIRPSIMIESGIRAEDDLTHKLV
DIVRINERLKESIDAGAPQLIIEDLWDLLQYHVATYFDNEIPGLPPSKHRSGRPLRTLAQ
RLKGKEGRFRGNLSGKRVDFSSRTVISPDPNISIDEVGVPEIIAKTLTVPERITPWNIEK
LRQFVINGPDKWPGANYVIRPDGRRIDLRYVKDRKELASTLAPGYIIERHLIDGDIVLFN
RQPSLHRISMMAHRVRVLKGLTFRLNLLVCPPYNADFDGDEMNLHVPQSEEAIAEAKEIM
LVHKNIITPRYGGPIIGAAQDYISGAYLLTVKTTLLTKEEAQQILGVADVKIDLGEPAIL
APREYYTGKQVISAFLPKDFNFHGQANVSSGPRLCKNEDCPHDSYVVIKNGILLEGVFDK
KAIGNQQPESILHWLIKEYSDEYGKWLMDNLFRVFIRFVELQGFTMRLEDVSLGDDVKKE
IYNEIDRAKVEVDNLIQKYKNGELEPIPGRTLEESLENYILDTLDKLRSTAGDIASKYLD
PFNFAYVMARTGARGSVLNITQMAAMLGQQSVRGERIKRGYMTRTLPHFKPYDISPEARG
FIYSSFRTGLKPTELFFHAAGGREGLVDTAVRTSQSGYMQRRLINALSDLRAEYDGTVRS
LYGEVVQVAYGDDGVFPMYSAHGKTVDVNRIFERVVGWKA
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaagaatataaaaggaataaagtttggaatactttctcctgacgaaataaga
aaaatgtcagtgactgcaataataacaccagacgtttatgatgaagacggtactccaata
gaaggaagcgtgatggatcctaggttaggtgttatagaacctggacagaaatgtccaact
tgtggtaacactttaggcaactgccctgggcactttgggcatatagaattagttagacca
gtaattcatgtaggtcttgtaaagcatatatatgagtttctaaaagccacatgtagaaga
tgtggtagggttaaaatttctgaagatgaaatagagaaatattctagaatatataatgca
ataaagaaaagatggccatcagcagctaggaggttaactgagtacgtaaagaagactgca
atgaaagctcaagtttgtccacactgtaatgaaaagcagtacaagataaagttggagaaa
ccatataatttctatgaggagaggaaagaaggtgtagctaaattaactccttccgacata
agagaaagattggaaaaaataccagattccgatgttgaaatactaggttatgatcctaca
accagtaggccagaatggatgatattaactgttcttccggttcctccaattacaattaga
ccttctattatgatagagagcggtataagagctgaagatgacttaactcataagttagtt
gatatagttagaattaatgaacgattgaaagagagtatagatgcgggagctccacagcta
ataatagaagatttatgggaccttttacagtatcatgttgcgacttactttgataacgag
attccgggattgcctccctctaaacatagatcagggagaccattaagaacattagcacag
agattaaaggggaaggaaggtagatttagaggtaatttatctggtaaaagagttgacttc
tcatctagaacagtcatatccccagaccctaatattagcatagacgaagtaggggttcca
gaaattatagctaaaacacttacagttccggaaagaataaccccatggaatatagaaaaa
ttaaggcagttcgttataaatggacccgataaatggcctggtgccaattacgtaattaga
ccagacggtagaagaattgatttaaggtatgttaaagataggaaggaactcgcatcaact
ttagctcctggatatataatcgagcgtcatctaattgatggagatatagtattatttaat
agacaaccttctcttcacagaatttcaatgatggctcatagggttagagtactaaaaggg
cttacatttaggttgaacttgctcgtatgtcctccatataacgccgatttcgatggggac
gaaatgaacttgcatgttccacagtcagaagaagcaatagctgaagccaaggagataatg
cttgtacataaaaacataataaccccaagatacggtggccctattataggagctgctcaa
gattatataagtggtgcttatctactaacagtaaaaactacgttattaactaaagaagaa
gcccagcaaatattgggtgtggcagacgttaaaattgatcttggggaaccggcaatttta
gcacctagggagtattacactggtaaacaagtaataagtgcttttctccctaaagatttt
aatttccacggtcaagctaacgttagtagtggccctaggctgtgcaagaacgaagattgt
ccacacgattcgtatgtagtgattaagaacggaatactattagaaggtgtatttgataaa
aaggctataggaaaccagcaaccagaaagtatcctccattggctgattaaggagtattct
gatgaatatggtaagtggttaatggataacctatttagagtatttattagatttgtcgaa
ttgcaagggtttacaatgagacttgaagatgtatctttaggagatgatgtaaagaaagaa
atttacaacgaaatagatagggctaaagtagaagtcgataatctaatacagaagtataaa
aatggagagttagaaccaataccgggaagaactttagaagagagcttagagaattacatt
cttgatacattagataagttaagaagtactgctggtgatatagcaagtaaatatttagat
ccgtttaatttcgcctatgtaatggcaaggactggagccaggggtagcgtattaaatata
acgcagatggctgctatgttaggtcaacaatcagttagaggggaaagaataaaaagaggg
tatatgactagaacattacctcactttaaaccttatgacatctcaccagaagctagaggt
ttcatttattcttcatttagaactggtctgaagccaaccgaattattcttccatgcagct
ggaggtagggaaggtctagtagatactgcagtgcgaacctcacagagtggttatatgcaa
agaagattaataaacgccttatcggacttaagggctgagtatgatgggactgtaagaagc
ttatatggcgaagttgttcaagtagcgtatggtgatgatggtgtatttcccatgtattca
gctcatggtaaaacggtagatgtaaatagaatctttgagagagtcgtggggtggaaggca
tga
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