Saccharolobus solfataricus P2: SSO0227
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Entry
SSO0227 CDS
T00054
Symbol
rpoB1
Name
(GenBank) DNA-directed RNA polymerase, subunit B' (rpoB1)
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
sso
Saccharolobus solfataricus P2
Pathway
sso03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sso00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SSO0227 (rpoB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sso03021
]
SSO0227 (rpoB1)
Enzymes [BR:
sso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SSO0227 (rpoB1)
Transcription machinery [BR:
sso03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
SSO0227 (rpoB1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_45
AF_2407
Motif
Other DBs
NCBI-ProteinID:
AAK40567
UniProt:
Q980R1
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(193195..195144)
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AA seq
649 aa
AA seq
DB search
MLYGINERIVEKTLYEMGVVPVEEVIRRVTEGGEDQNEYLKWSKVILNGRLIGYYQDGGE
LANKIRERRRKGEISDEVNVGHIVTDFINEVHVNCDSGRVRRPLIIVSNGNPLVTIEDIE
KLESGAITFDDLVRQGKIEYLDAEEEENAYVALEPNDLTPDHTHLEIWSPAILGITASII
PYPEHNQSPRNTYQSAMAKQALGLYAANYQLRTDTRAHLLHYPQRPLVQTRALDIIGYTN
RPAGNNAILAVMSFTGYNMEDSIIMNRSSVERGMYRSTFFRLYSTEEVKYPGGQEDKIVM
PEAGVRGYKGKEYYRLLEDNGVVSPEVEVKGGDVLIGKVSPPRFLQEFKELSPEQAKRDT
SIVTRHGEMGIVDLVLITETAEGNKLVKVRVRDLRIPTIGDKFASRHGQKGVIGMLIPQV
DMPYTVKGVVPDIILNPHALPSRMTLGQIMEGIAGKYAALSGNIVDATPFYKTPIEQLQN
EILRYGYLPDATEVVYDGRTGQKIKSRIYFGVVYYQKLHHMVADKLHARARGPVQILTRQ
PTEGRAREGGLRFGEMERDCLIGFGTAMLLKDRLLDNSDRTMIYVCDQCGYIGWYDKNKN
KYVCPIHGDKSNLFPVTVSYAFKLLIQELMSMIISPRLVLEDKVGLSGG
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
ttgctgtacggaataaatgagaggattgtagaaaaaacactttatgaaatgggagtagtt
ccagtggaggaggtcataagaagagtaacggaaggcggagaggatcagaatgagtatctg
aaatggtctaaggttatactcaatggaagattaataggctattatcaagatggtggagaa
ttagctaataagataagagaaagaaggagaaaaggagaaattagtgatgaagtaaacgta
ggccatatagtgacagattttattaatgaggttcatgttaattgtgattctggaagagtt
agaagaccacttataattgtttctaacggtaacccgttggtaactattgaagacattgaa
aagttagaatcaggtgctattacatttgacgatcttgttagacaaggaaagatagagtat
ctagatgcagaagaagaggagaacgcttatgttgctttagaacctaatgacttaactcca
gatcatactcatttagaaatatggtctccagctattttaggcataacagcgtctataata
ccatatccagagcataatcaatcacctagaaatacataccaatcagctatggcgaaacaa
gctctaggtctatatgcagcaaattatcaattacgtacggacacgagagcacatttactt
cattatccacaaagacctctagttcaaactagggcattagatattataggatatacaaat
aggccggccggaaataatgctatattagccgtaatgtcatttactggctacaatatggaa
gattcaataattatgaatagatcctccgtggagaggggaatgtatagatctacatttttt
aggctttactcaacggaagaggtaaaataccctggaggtcaagaagataaaatagtaatg
ccagaagctggtgttagaggatataagggcaaagaatattacagacttctagaggataac
ggagtagtctctccagaggtcgaagtgaagggaggagatgttttaataggtaaagttagc
cctccaagattcttacaagaatttaaagaattatctccagagcaagctaagcgtgacacc
tcaatagttacaagacatggtgaaatgggtatagtggatttagttctaattaccgaaact
gctgagggtaataagctagttaaggtaagagtaagagatcttaggataccaacaattggc
gataaattcgccagtagacatggacaaaaaggcgttataggtatgctcataccacaagtt
gacatgccatataccgttaaaggcgttgtgccagatataatattaaatcctcatgcattg
ccatctagaatgacgttaggacaaattatggaaggaatagctggtaaatatgcagcatta
tccggaaatattgtagatgctacacctttctacaagacacctatagaacaattacaaaat
gagattttgagatacggttatctaccagatgctactgaagtagtgtatgatggacgtact
ggacagaaaattaaatctagaatatactttggagtagtctattatcagaaattgcatcac
atggtagcagataagcttcatgctagagctaggggtccagtccaaattttaactagacaa
ccaacagaaggaagagctagagaaggtggtttaagatttggagaaatggagagagattgc
ttaattggttttggtactgcaatgcttcttaaagacaggttattggataactctgatagg
acaatgatttacgtttgtgatcagtgtggttatataggctggtacgataagaataagaat
aaatatgtatgcccaatacatggtgataagagtaacttgttcccagttactgtatcttac
gcatttaagcttttaattcaagaactaatgagtatgattatctcacctaggttagttttg
gaggataaagttggattaagtggaggttaa
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