Saccharolobus solfataricus P2: SSO0287
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Entry
SSO0287 CDS
T00054
Name
(GenBank) RNase L inhibitor
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
sso
Saccharolobus solfataricus P2
Brite
KEGG Orthology (KO) [BR:
sso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sso03009
]
SSO0287
Ribosome biogenesis [BR:
sso03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
SSO0287
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
Fer4_RLI
Fer4
AAA_14
AAA
Fer4_10
KAP_NTPase
Fer4_2
Fer4_6
RNA_helicase
Fer4_7
LdpA_Fe-S-bd
Fer4_9
Fer4_16
VapE-like_dom
AAA_18
Fer4_21
nSTAND3
NACHT
Rad17
NB-ARC
Fer4_4
AAA_24
MPS3_helical
dNK
Fer4_17
AICE_RepA_C
Fer4_8
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
AAK40626
UniProt:
Q980K5
Structure
PDB
PDBj
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All DBs
Position
complement(244748..246550)
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AA seq
600 aa
AA seq
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MRVAVINYDFCKPDKCNLECINFCPVDRSGGKAIELSEIVKGKPVIYEETCIGCGICVKK
CPYEAISIVNLPDELEGEVIHRYKVNGFKLFGLPTPKNNTILGVLGKNGVGKTTVLKILA
GEIIPNFGDPNSKVGKDEVLKRFRGKEIYNYFKELYSNELKIVHKIQYVEYASKFLKGTV
NEILTKIDERGKKDEVKELLNMTNLWNKDANILSGGGLQRLLVAASLLREADVYIFDEPS
SYLDVRERMNMAKAIRELLKNKYVIVVDHDLIVLDYLTDLIHIIYGESSVYGRVSKSYAA
RVGINNFLKGYLPAENMKIRPDEIKFMLKEVSDLDLSKDLKTKMKWTKIIKKLGDFQLVV
DNGEAKEGEIIGILGPNGIGKTTFARILVGEITADEGSVTPEKQILSYKPQRIFPNYDGT
VQQYLENASKDALSTSSWFFEEVTKRLNLHRLLESNVNDLSGGELQKLYIAATLAKEADL
YVLDEPSSYLDVEERYIVAKAIKRVTRERKAVTFIIDHDLSIHDYIADRIIVFKGEPEKA
GLATSPVTLKTGMNEFLRELEVTFRRDAETGRPRVNKIGSYLDRVQKERGDYYSMVLSTQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
gtgagagttgctgtaataaattatgacttttgtaagccagataaatgtaacttagagtgt
ataaatttctgtcctgttgataggtctggaggaaaagccatagaactgtcggaaattgtt
aagggaaaaccagtaatttatgaagaaacttgtataggttgtggaatatgtgtaaagaaa
tgtccatatgaagctatatcaattgttaatcttccagacgagttagaaggagaggttata
catagatacaaagtaaatgggttcaaattattcggcttacctacacctaaaaataatacg
atattaggagtattagggaagaatggagtagggaaaaccacagtacttaaaatactagct
ggtgaaataatcccaaattttggagatccaaattccaaagtaggtaaagacgaagtgtta
aaaaggtttagaggaaaagaaatttataattattttaaagaattatatagtaatgaacta
aaaatagtacataagattcaatacgttgagtacgcttcaaaattccttaaaggtacggtg
aatgaaattttgacaaagatagatgaaagagggaaaaaggatgaagttaaagaacttcta
aacatgactaatctttggaataaggatgctaatatactttctggaggaggacttcagcga
ttattagtagctgcttcactattgagagaagcagatgtatacatatttgacgaaccttct
tcttatctagatgttagggaaagaatgaatatggctaaggcaattagagaattgttaaag
aataaatatgttatagttgtggatcatgacttaatagttttggattatcttacagattta
atacatataatctatggagaaagttcagtatatggaagggtttcaaaatcttatgcagct
agagtagggataaataattttcttaaaggatatttaccagctgaaaatatgaaaataaga
ccagacgaaataaagtttatgctaaaagaggttagtgacctagacctttccaaagatcta
aaaacaaaaatgaaatggactaagataatcaagaagttaggtgattttcagttagtagta
gataatggagaggctaaagagggagaaataatcggaattttaggaccaaacggaattgga
aagacaactttcgcaagaatattagttggcgaaattacagcagatgaaggatctgtaacc
ccagaaaaacaaatattatcttataaaccacaacgaatctttcctaactatgatggaact
gttcaacaatacttagaaaatgcgagtaaagacgctctttctacctcatcctggttcttc
gaagaggtaactaaaaggcttaacttgcacagactgctggaatctaatgtgaatgatcta
agtggaggcgaattacagaaattatatatagcagctactttggcaaaagaagctgatctt
tacgttttggatgaaccttcctcttatctcgatgtcgaagagagatatatagtcgctaaa
gctataaagagagttacgagggagaggaaagcggtaacttttatcatagatcacgatctt
tcaatacatgattatatagcggatagaattatcgttttcaaaggagaaccagaaaaagct
ggattagcaacatctccggtaacgttaaagacgggaatgaatgagtttttgagagaattg
gaggtaacgttcaggagagatgcagagaccggaagacctagagtaaataagattgggagt
tacttagatagagtccagaaagaaagaggagattattactccatggttctttctacccag
taa
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