Saccharolobus solfataricus P2: SSO0292
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Entry
SSO0292 CDS
T00054
Name
(GenBank) Conserved hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
sso
Saccharolobus solfataricus P2
Pathway
sso03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sso00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SSO0292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sso03019
]
SSO0292
Messenger RNA biogenesis [BR:
sso03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
SSO0292
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
SSO0292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
S1
OB_RRP5_4th
Zn_ribbon_Com
DUF5817
Cas12f1-like_TNB
HypA
C1_1
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AAK40632
UniProt:
Q980J9
LinkDB
All DBs
Position
complement(250020..250589)
Genome browser
AA seq
189 aa
AA seq
DB search
MRTQGELTLPGEELAVIEEFMTGDGTYEQNGIVRAAVVGKIFYDMLNRKSNVLGFKKIIF
QHLKKAKYVIGIVNSIKEDSALVSIVGIEERGLASPISAYLHISQISNKKINNVTDAIKI
GDVIKAKLLSYTFPLALTIKMKDLGVIYARCSRCGYLLIKQDENNLKCQRCGNIEQRKIG
SYMVKKGGN
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
gtgagaactcaaggcgaattaactttaccaggagaggagttagcagtaattgaagaattt
atgactggcgatggtacgtatgaacaaaatggtatagttagagccgcagttgtaggaaag
atcttttatgatatgctaaataggaagagtaacgtactaggatttaagaaaattatattt
caacatttgaagaaggctaaatatgtgattggcattgttaattctatcaaagaagactca
gcactagtttcaatagtagggatcgaggagagaggtcttgcgtcaccaatttcagcttac
ttacatatttctcaaataagtaataaaaaaattaataatgtaacagatgctataaaaatc
ggagatgtaattaaagctaaattactttcatacacttttcccttggctttgaccattaaa
atgaaagatcttggtgttatttacgctagatgctcaagatgtggatatttattgattaag
caagacgaaaataatttaaaatgtcagagatgcggaaatattgaacaacgaaaaatagga
tcttatatggtgaagaaaggtggaaattag
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