KEGG   Saccharolobus solfataricus P2: SSO0394
Entry
SSO0394           CDS       T00054                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
sso  Saccharolobus solfataricus P2
Brite
KEGG Orthology (KO) [BR:sso00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sso03400]
    SSO0394
Enzymes [BR:sso01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SSO0394
    5.6.2.6  RNA 3'-5' helicase
     SSO0394
DNA repair and recombination proteins [BR:sso03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SSO0394
SSDB
Motif
Pfam: DEAD Helicase_C WH_Lhr DEAD_assoc ResIII AAA_19 Cas3-like_C_2 Zn_ribbon_PF0610 SecA_DEAD
Other DBs
NCBI-ProteinID: AAK40723
UniProt: Q980C0
LinkDB
Position
complement(343869..346610)
AA seq 913 aa
MINVTNEFLVRLKKLGYEDLTPIQKIAIPKVLSGKNVLIIAPTGYGKTEAAILPIFYTIF
KDKPEKISTLYITPLRALNRDLELRLRRLGEAFNISVNVRHGDSSQKERKEILDNPPDVL
LVTPETLLYLVLNDTFRKYFTNLKWIIIDELQEMLDEKRGIELSVLIQRIKKIATRNKIQ
LIGISATIGDVEIAKRYLDREGEVEIANINAIKDIKVDLILPKVEKKDADLAVKLGLRPD
TIARLEKLNEIIKNNKPIIIFTNTRETSEFIANQLMSNYSLKIASHHGSLSREIRIKTEN
DFKNGNIDAIVATSSLELGIDIGRINLVVQYMSPRQVIRLIQRVGRSGHKIGRTSIGYVI
PSEDLFDILECRAIIEALYSGYLEKPLFEENPLDVAAHEIAGMVLEGYKNPKEMMEILRN
SFYFENFTDEMFENVIELLESAKIVKRREDGSLFPSRRIWKYYYTTNMIPDSIRSYIVID
HATNMKIGTLDEDFVVTLDEDSVFILGSRLWKVVSIENDRIFVERAELKNGILPSWFGES
IPVEKEIARKVYEYIYAVEKEKRETEDNSLAEVVREYMKRGYPELRPDLILVEIVKNNLI
IVHSPFGSRGNNTLGAIISVMLDVEKQTKTTYRADPYHIAISSVLPITKNDMEKIVSTLN
STPIDRIIEILKKGIKESPQFKWKLLVEIKRFGMIDPEKEITLTSSIIKAYGDTIIGEEA
VKELLVKNYDVEIIKELKNYNWKIVEVYEASPLAKQFLDKILNYTSFDKEEKPLMIEIFK
KRLENKELKLICLSCGWEGKYSIINSPSKCPKCSSIFLTATNPDDSDSVKIVRKAIKGEK
LTSKERRQLEDLKRVASFFPDYGKYSLIALATNGVGPSNLGKVLSKLNEGENEFYMALID
EEKRFIRTRKYWH
NT seq 2742 nt   +upstreamnt  +downstreamnt
atgataaatgtaaccaatgaattcttggtaagactgaagaaacttggctatgaagattta
acgccaatccaaaaaatagcaataccaaaagtactatctggaaagaatgttttaatcata
gcaccaacggggtatggcaaaactgaggcagcgatattaccaattttttatactatcttt
aaagataaacctgaaaaaatctcaacactctatataactcccttaagagcgctaaataga
gaccttgagttaaggttaagaaggctaggtgaagcctttaatattagtgttaacgtaaga
cacggagattcctctcagaaagaaaggaaggaaattttggataaccctcctgacgtatta
ttagtaacgccagaaacgttactttacttagtgctaaacgatacttttaggaagtacttt
accaatctgaaatggataataatagatgaattacaagaaatgttagatgagaaaagagga
atagaactctctgtactaatccaaaggatcaaaaaaatagcaacaagaaataaaattcaa
ttaataggaatttcagctactattggtgatgttgaaatagcaaaaaggtacttagataga
gagggagaggtcgaaatagcgaatatcaacgcaataaaggatataaaagtggatttaata
ctccctaaggttgaaaagaaagatgcggatttagcagtaaagttgggattaagaccagat
acaattgcgagacttgagaaacttaacgaaattataaaaaacaacaaacctattataata
tttacaaatactagggaaactagcgaattcatagcaaaccaactcatgagtaactattcc
ttaaaaatagcttctcatcacggctcattatcaagagaaattagaataaaaactgaaaac
gacttcaaaaacggtaatatagacgctatagtcgcaacctcgagcttagaattgggtatt
gatatcggtagaattaatctagttgtccaatacatgtcaccgagacaagtaattaggtta
attcaaagagtcggaagaagtggacataaaataggtagaacgtctataggttacgttata
ccctcagaggaccttttcgatattttagagtgcagagcaataattgaagcattatattct
ggttatttggaaaaacccctgtttgaagaaaacccacttgacgttgcagcacatgaaata
gcgggaatggttttagaaggttataaaaaccctaaagaaatgatggagattcttcgcaat
tcattttatttcgagaacttcaccgatgagatgttcgaaaacgttatagaattattagag
agcgcaaaaatagttaaaagaagagaagacggaagcttatttccaagtagaagaatttgg
aaatattattacactactaatatgataccagattccattagaagttatatagtaattgac
catgctaccaacatgaaaataggtaccttagacgaagatttcgtagtcacactagatgaa
gatagtgtattcattttaggaagtagactatggaaagtcgtatccatagagaacgacaga
atatttgtggaaagggctgagctaaaaaacggaatattgcctagttggttcggagaatca
attccagttgagaaagagatagctaggaaagtctacgagtatatttacgcagtggagaag
gaaaaaagggaaactgaagataatagcttagctgaagtagttagagaatacatgaaaaga
ggatatccagaactaagaccagatctaatccttgttgaaatagtaaagaataatttaata
atagtgcattcaccattcggctcaagaggaaacaacacgcttggtgccataatttcagtt
atgttagacgtagaaaaacagaccaaaacgacttatagggctgatccatatcacatcgca
atatcttctgtactgccaataactaaaaatgatatggaaaaaattgtctctacgctaaat
tctactcctatagacagaataattgaaatattaaagaagggaattaaagaaagtccgcaa
ttcaagtggaaattattggttgagataaagaggtttgggatgatagacccagaaaaggaa
ataacgcttacctcatccattataaaggcttatggagatacaataattggagaagaagca
gttaaggaattattagtcaaaaattatgatgtagaaataataaaggaactcaagaattac
aactggaaaatagtagaggtttacgaagcgtcccccttagctaaacaatttctagataaa
atccttaactacacctcgttcgataaagaagaaaaaccattaatgattgaaattttcaaa
aagagattagaaaacaaggagctgaaattaatctgtctctcatgtgggtgggagggaaaa
tactctataattaactcacctagcaaatgccccaaatgttcctcaattttcttaactgca
actaatccagatgatagcgattccgtgaagatagtgagaaaagcaataaaaggtgagaaa
ttaacaagtaaggagagaagacagttagaagacttgaagagagttgcctccttcttccca
gattacggtaagtacagcctaatagcattagcaactaatggagttggaccaagtaattta
ggcaaagtattgagtaaattaaatgaaggagaaaatgagttttacatggccttaatagat
gaagagaaaagatttataagaacaagaaaatactggcactaa

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