Saccharolobus solfataricus P2: SSO0446
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Entry
SSO0446 CDS
T00054
Symbol
TFB-1
Name
(GenBank) Transcription initiation factor IIB (TFIIB) homolog (TFB-1)
KO
K03124
transcription initiation factor TFIIB
Organism
sso
Saccharolobus solfataricus P2
Pathway
sso03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sso00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SSO0446 (TFB-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sso03021
]
SSO0446 (TFB-1)
Transcription machinery [BR:
sso03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
SSO0446 (TFB-1)
Prokaryotic type
Archaeal type
TFB
SSO0446 (TFB-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Sigma70_r4
HTH_AsnC-type
HTH_Tnp_ISL3
HTH_24
Sigma70_r4_2
TMP_3
HTH_Crp_2
ORC6_2nd
HTH_11
RB_B
NikA-like
Motif
Other DBs
NCBI-ProteinID:
AAK40772
UniProt:
P58111
LinkDB
All DBs
Position
complement(385794..386723)
Genome browser
AA seq
309 aa
AA seq
DB search
MLYLSEENKSVSTPCPPDKIIFDAERGEYICSETGEVLEDKIIDQGPEWRAFTPEEKEKR
SRVGGPLNNTIHDRGLSTLIDWKDKDAMGRTLDPKRRLEALRWRKWQIRARIQSSIDRNL
AQAMNELERIGNLLNLPKSVKDEAALIYRKAVEKGLVRGRSIESVVAAAIYAACRRMKLA
RTLDEIAQYTKANRKEVARCYRLLLRELDVSVPVSDPKDYVTRIANLLGLSGAVMKTAAE
IIDKAKGSGLTAGKDPAGLAAAAIYIASLLHDERRTQKEIAQVAGVTEVTVRNRYKELTQ
ELKISIPTQ
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgttgtatttgtctgaagaaaataaatccgtatccactccttgccctcctgataagatt
atctttgatgcagagaggggggagtacatttgctctgaaactggagaagttttagaagat
aaaattatagatcaagggccagagtggagggccttcacgccagaggagaaagaaaagaga
agcagagttggagggcctttaaacaatactattcacgataggggtttatccactcttata
gactggaaagataaggatgctatgggaagaactttagaccctaagagaagacttgaggca
ttgagatggagaaagtggcaaattagagcgagaattcaatcttccatagatagaaactta
gcacaagctatgaatgaactagaaagaattgggaatttactaaacttaccaaaatcagtt
aaagatgaggctgcattaatctatagaaaagcagtagagaaaggattagtgaggggaagg
agtatagaaagcgtcgtagcagctgcaatatacgctgcatgtagaagaatgaagttggcc
agaactttggatgagatagcccaatatactaaggctaatagaaaggaagtagcgagatgc
tatagactattacttagagaactagatgttagtgtaccagtaagtgatcccaaggattac
gtaactagaatagctaacttgttaggtctaagcggagctgttatgaaaacggcggctgaa
attatagataaggcgaaaggttctgggttaactgctggtaaagatccagctggtttagct
gcggctgcaatttatatagcatcattactacatgatgaaagaagaacgcaaaaagagata
gctcaagttgcaggtgtcacggaagttactgtgagaaacagatataaagagttaacacaa
gagctaaaaatatcaatacctactcaataa
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