Saccharolobus solfataricus P2: SSO0735
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Entry
SSO0735 CDS
T00054
Symbol
rph
Name
(GenBank) Ribonuclease PH (rph)
KO
K11600
exosome complex component RRP41
Organism
sso
Saccharolobus solfataricus P2
Pathway
sso03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sso00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SSO0735 (rph)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sso03019
]
SSO0735 (rph)
Messenger RNA biogenesis [BR:
sso03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
SSO0735 (rph)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
SSO0735 (rph)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
AAK41031
UniProt:
Q9UXC2
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(625758..626504)
Genome browser
AA seq
248 aa
AA seq
DB search
MREMLQVERPKLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYG
PKEMHPRHLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELF
PRTAIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNET
EDMWGEADMPIAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREALKSKY
VEFKEEGV
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
gtgagagaaatgcttcaagtggagagaccaaaactaattcttgatgatggaaagcgaaca
gatggtagaaagccagatgaattaagaagtataaagatagaattaggtgttctcaaaaat
gctgatggctcggcaatttttgaaatgggaaatacgaaggctatagctgcagtttacggt
cctaaggagatgcatccaaggcacctatctcttccagatagggcagtacttagagtgaga
tatcacatgacaccattctctacggatgagagaaagaatccagcacctagcagaagagag
attgagctttctaaggttataagagaggctttagaatcagcagttttagtagagctgttt
cctagaactgctatagatgtatttactgaaatattacaagcagatgctggatccagatta
gtttcattaatggccgcctccttagcactagcagatgctggaattcctatgagggattta
atagctggagtggctgtagggaaggctgatggtgtaataattctagatttaaatgaaacc
gaggatatgtggggagaggctgacatgcctattgcaatgatgccatctttaaaccaagta
acgttatttcaactaaatggtagtatgacaccagatgagtttaggcaagcttttgatcta
gcagttaagggtataaatataatatataatttagagagagaggctctaaaaagtaagtat
gtagagtttaaagaagagggtgtatag
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