Streptococcus sobrinus: DK181_00700
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Entry
DK181_00700 CDS
T05567
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ssob
Streptococcus sobrinus
Pathway
ssob03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ssob00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DK181_00700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssob03021
]
DK181_00700
03400 DNA repair and recombination proteins [BR:
ssob03400
]
DK181_00700
Enzymes [BR:
ssob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DK181_00700
Transcription machinery [BR:
ssob03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DK181_00700
DNA repair and recombination proteins [BR:
ssob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DK181_00700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SusF_SusE
Motif
Other DBs
NCBI-ProteinID:
AWN18061
LinkDB
All DBs
Position
104355..105293
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPTITKIDENKDYGRFVIEPLERGYGTTLGNSLRRVLLSSLPGAAVTSIKIDGVL
HEFDTIPGVREDVMQIILNIKGLAVKSYVEDEKTIELDVTGPAEVTAGDILTDSDIEIVN
PDHYLFTIAEGHSLKATMTVAKNRGYVPAEGNKNDSAPVGTLAVDSIYTPVKKVNYQVEP
ARVGSNAGFDKLTIEIMTNGTIIPEDALGLSARVLIEHLNLFTDLTEIAKTTEVMKEAES
VSNDQVLDRTIEEIDLSVRSYNCLKRAGINTVFDLTEKTEPEMMKVRNLGRKSLEEVKVK
LAELGLGLKNDK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtttgaaaaaccaacaataacaaaaattgatgaaaataaagattatggcaga
tttgtcatcgaaccacttgaacgtggttacggaacaactctaggtaactctcttcgtcgt
gtacttctgtcttcacttccaggtgcagcggtaacatcaattaagattgatggagtactt
cacgagtttgatacaatccctggagtccgtgaagatgttatgcaaatcatccttaacatt
aaaggacttgctgtaaaatcttacgtcgaagacgaaaaaacaatcgaacttgatgttaca
ggtccagcagaagtgactgccggagacatcctgacggatagtgacatcgaaattgtaaat
cccgaccactatcttttcaccattgctgaaggacattccctcaaggcaactatgacggtt
gctaagaatcgtggttacgttccagcagaaggtaacaaaaacgatagcgcacctgtcgga
actttggcagtagattcaatctacacccctgtcaaaaaggttaattatcaggttgaacca
gctcgcgttggtagcaatgctggttttgataaattgaccattgaaattatgacgaatggg
acaatcattcctgaagatgcccttggtctttctgctcgtgtcttgattgaacacttgaat
ctctttactgatttaactgaaattgctaagacaactgaagttatgaaggaagcagaaagt
gtttcaaatgaccaagtcttggatcggactatcgaagaaatcgatctgtctgttcgctca
tacaactgtttgaaacgtgcaggaatcaatactgtatttgacctcactgaaaaaacagag
cctgaaatgatgaaagttcgcaacttgggacgcaagagtcttgaggaagtcaaggttaaa
ttggctgaacttggtctcgggctaaaaaatgataaataa
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