Streptococcus sobrinus: DK181_01725
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Entry
DK181_01725 CDS
T05567
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ssob
Streptococcus sobrinus
Pathway
ssob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DK181_01725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssob03019
]
DK181_01725
Messenger RNA biogenesis [BR:
ssob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DK181_01725
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_KhpA-B
HDOD
KH_2
KH_PNO1_2nd
dUTPase
Motif
Other DBs
NCBI-ProteinID:
AWN18227
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Position
308286..309893
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AA seq
535 aa
AA seq
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MLDIILAIVAILIGLGIGYGAMVAKTKVDREAAELALLNAQQEAVTIREKAQDDAGHIKK
AAELDMKAERKELLLEAKEDARKYREEVDKEFKSDKQELKQMEARLTERASSLDRKDENL
SSKERTLDSKEQSLSDKSKHIDEREANIAQLEEEKQAELQKVANMSTDQARDVILSQTEN
ELTQDIASRIKDADEEVKRTIDKKAKNLLAQAMQRLAGDYVTEQTITTVHLPDDSMKGRI
IGREGRNIRALESLTGIDVIIDDTPEVVVLSGFDPIRREIARMTLEALIQDGRIHPARIE
ELVEKNRQEIDNRIREAGEAAAYEIGAPNLHPDLIKIMGRLQYRTSYGQNVLRHSVEVGK
LAGILAGEIGENVALAKRAGFLHDMGKALDRDVDGSHVEIGTEFARKYKENPVVVNTIAS
HHGDVEPESVIAVLVAAADALSSARPGARNESVENYIKRLRDLEEIASGFDGVQNSFALQ
AGREIRIMVQPNKISDDQVTILAHKVRKKIEDNLDYPGNIKVTVIRELRAIDYAK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgctagatattattttagcgattgttgctatcctcattggtttaggtattggttatgga
gccatggttgccaagacaaaggttgaccgtgaagctgcagaactagctcttttaaacgct
caacaagaagcagtcaccattcgtgagaaggcccaagatgatgctggtcatattaaaaag
gcagcagaattagatatgaaggccgaacgcaaggaattacttctggaagccaaggaagat
gccagaaaatatcgtgaagaagttgataaagaatttaagtctgacaaacaagaattgaag
caaatggaagctcgcttgaccgagcgtgcctcaagtcttgatcgcaaagatgagaatttg
tccagcaaggaaaggacgctggatagtaaagaacaaagtctttctgataaatctaaacac
attgatgagcgagaagctaacatcgcacagttagaagaagaaaaacaagcggagttgcaa
aaggtagccaatatgtctaccgaccaggccagggatgttattctgagtcaaacggaaaat
gaactgacccaggacatcgctagtcgcatcaaggatgcggacgaagaggttaaacggacg
attgataagaaggctaagaatctcttagctcaagccatgcaaaggctggctggggactat
gtgaccgagcaaaccatcacaacggttcatctgcctgatgactctatgaagggacggatt
attggtcgtgaaggtcgtaatattcgggctctggaaagtctgaccggaattgatgttatc
attgatgatacaccagaggtggttgtcctgtctggctttgacccaatccgtcgagaaatt
gctcgaatgactctagaagccctgattcaggatggccggattcatccagcccggattgaa
gaattggttgaaaagaaccgacaagaaattgataatcgcattcgtgaagcgggggaagcg
gcagcctatgaaattggagcgccaaacctccatcctgatttgattaaaatcatgggacgc
ttgcaataccggacttcttatggacaaaatgtcctgcgtcactcggttgaggtcggtaag
ttggctggtatcctggctggtgaaattggtgaaaatgtggccctggctaagcgggctggt
ttcctccatgatatggggaaggccttggaccgtgatgttgacggtagccatgtggaaatc
ggaaccgaatttgctcgtaagtataaggaaaacccagtcgtggttaacactatcgccagt
caccatggggatgttgagcccgagagtgttatcgctgtcctagtagcagctgcggatgcc
ctcagttcagcccgcccaggcgctcggaatgaatcggttgaaaattatatcaagcgtctg
cgtgatttggaagaaattgcttccggctttgatggggtgcaaaatagttttgccctgcaa
gctggtcgtgaaattcgcatcatggttcaacctaataagatttccgatgaccaagtgact
atcttggctcacaaggttcgtaagaaaattgaagacaatctggattacccaggtaatatc
aaggttaccgttatccgcgaattgcgggctattgattatgcgaaataa
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