Streptococcus sobrinus: DK181_03780
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Entry
DK181_03780 CDS
T05567
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ssob
Streptococcus sobrinus
Pathway
ssob03410
Base excision repair
ssob03430
Mismatch repair
ssob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DK181_03780 (recJ)
03430 Mismatch repair
DK181_03780 (recJ)
03440 Homologous recombination
DK181_03780 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssob03400
]
DK181_03780 (recJ)
DNA repair and recombination proteins [BR:
ssob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DK181_03780 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DK181_03780 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DK181_03780 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
TPP_enzyme_N
FTH
Motif
Other DBs
NCBI-ProteinID:
AWN18604
LinkDB
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Position
740104..742341
Genome browser
AA seq
745 aa
AA seq
DB search
MISSKFDWKQVDQAPSEPFLELAKKENLDNLAAGILYERGIDDQAKLYDFLSADLSQLHD
PYLLHDMDKAVERIRSAIEAGQQILIYGDYDADGMTSSSIMQEALEMLGAEYQVYLPNRF
TDGYGPNLSVYKYFIEQQETSLIVTVDNGVAGHEAIAYAQEQGIDVVVTDHHSLPDNLPD
AYAIVHPEHPEGDYPFKYLAGCGVAFKLASALLEGIPNELLDLVAIGTIADMVSLTGENR
ILVKYGLQMLAQTERVGLQELMQLADIEPSDLNEETVGFKIAPMLNALGRLDDPNPAVEL
LTGFDDQEAGEIAHMIQEKNEERKQIVQDIYDQALTMIDPDKPAQVLAKEGWHPGVLGIV
AGRILESLSQPVILLNIEDGRAKGSARSVEAVNIFAALNPHRDIFDAFGGHAGAAGMTLP
VENLDKLSDALCSYILDNRLDKAGKNSLTIDEELHLPDLSLETIKSLEKLSPFGMDNKKP
VFLLKDFQVLQSRTMGQNGAHLKLKLAQDGAEFDLVAFSQGHLAQEFAQASGLELAVTLS
VNKWNGNTSLQLMLVDARVQGVQLIDIRAKSAQLPKGVPSLQQLVEADKQVQAVVLLKVP
EQASQLKEAFQNQDFSAIYFKNQIKQAYYLTGYGTREQFAKLYKTIYQFPEFDIRHKLKE
LADYLKIPDILLIKMIQIFEELDFVTIADGIMTVNKSADKKPISDSQIYQDLVALVKYQE
LMALGSPREIYDWLTGASKNNEQEF
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgatttcttctaagtttgattggaaacaagttgaccaggctcctagtgagcccttttta
gagctggcaaaaaaagaaaatttggataacctggcagccggtattctctatgaaagggga
attgatgaccaggccaagctctatgattttctgtcagctgacctgtcccaactccatgat
ccttatttacttcatgatatggataaggctgtcgagcggattcgttctgccattgaagct
ggccagcaaatcctgatctacggggactacgatgccgatggcatgacctccagctctatt
atgcaggaggccttggagatgttgggggctgagtatcaggtttatctgcccaatcggttt
accgatggttatgggcccaatctcagcgtttataagtactttattgagcagcaggaaacc
tctctgattgtgaccgttgataatggggtggctggtcatgaggccattgcctatgcacag
gagcaggggattgatgtcgtcgttaccgaccaccattccctgccggataatctgcccgat
gcttacgctattgttcaccccgagcatccagaaggagactatccctttaaatatctggcc
ggctgtggtgtggccttcaaactagcctctgccctcttggaaggtattcccaatgagtta
ctggacctggtcgctatcggaaccattgccgatatggttagcctgactggggaaaatcgg
attctggtcaagtacggtctccagatgctggctcagactgaaagggtgggcctgcaggaa
ctcatgcagctggctgatattgagcctagcgacctcaatgaggaaaccgttggcttcaag
attgcccccatgctcaatgccctaggtcgcctagatgaccccaaccctgctgtcgagctc
ctgaccggctttgatgaccaagaggctggcgaaattgctcacatgattcaggagaaaaat
gaggaacgcaagcagattgttcaggatatctatgaccaggccctgaccatgattgaccct
gacaaaccagcccaagttctagcaaaagagggctggcatcctggggtcctgggcattgtg
gctggtcggattttggaatctctcagtcagcccgttatcctcctcaatattgaagacggc
agggccaaggggtcggcccgctcggttgaggctgtcaatatctttgctgccctcaatcct
catcgggacattttcgatgcctttggtggccatgctggtgcagctggtatgaccttgcca
gttgagaacttggacaagctctcagatgctctttgtagctatatccttgataataggttg
gataaggctggcaagaatagcctgaccattgatgaggagcttcacttgcccgacctgtct
ctggagaccatcaagagcctagaaaagctgtctccctttggcatggataataagaaaccg
gtatttcttctcaaggatttccaggtcctgcaaagccgaactatgggacaaaatggagcc
cacctcaaactcaaactggcccaagatggtgcagaattcgatctggtagccttctcccaa
ggccatctggcccaagaatttgcccaggccagcggtctcgagctggcggtgaccctctca
gtcaataaatggaacggtaataccagtcttcagcttatgctggttgatgctcgagtgcaa
ggggtgcaactcattgatattagggctaaatcggcccagttacctaagggtgtgcccagc
ctccagcagctagtagaagctgataagcaggttcaagctgttgtcctcctaaaggttcca
gagcaagctagccaactcaaagaggccttccaaaatcaggatttttcagccatctatttt
aaaaatcagattaagcaggcctattatctgactggctacggaactcgagagcagtttgcc
aaactttacaagaccatctatcaatttccagaatttgatatccgtcataagctcaaagaa
ctggcagactatctcaaaatccctgatattctcttaattaagatgattcagatttttgag
gaattggacttcgtgaccattgctgatggtatcatgacggtcaataagtctgccgacaag
aagcctatctccgacagccaaatttatcaggatttggtggccctggtcaagtaccaagaa
ctcatggccctcggaagccccagagaaatctatgactggctgacgggtgcttcaaaaaat
aacgagcaggaattttga
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integrated database retrieval system
