Streptococcus sobrinus: DK181_04070
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Entry
DK181_04070 CDS
T05567
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ssob
Streptococcus sobrinus
Pathway
ssob03030
DNA replication
ssob03430
Mismatch repair
ssob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DK181_04070
03430 Mismatch repair
DK181_04070
03440 Homologous recombination
DK181_04070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssob03032
]
DK181_04070
03400 DNA repair and recombination proteins [BR:
ssob03400
]
DK181_04070
Enzymes [BR:
ssob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DK181_04070
DNA replication proteins [BR:
ssob03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DK181_04070
DNA repair and recombination proteins [BR:
ssob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DK181_04070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
tRNA_anti-codon
HHH_6
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AWN18653
LinkDB
All DBs
Position
797515..800622
Genome browser
AA seq
1035 aa
AA seq
DB search
MFAPIDTKTVYSFMDSLVNLKSYVKRAKELGYSHLGIMDQDNLYGAYHFVVEAKKEGLQA
VIGLELSFRLDDESPLTLQLLALDTRGYQNLLKLSTLKMSEGLGLKDLPNYLSGLAVLVP
YFDEIDSLELPFDYYIGVFLDSPKQAYSKPILPLQTVRYYQEEDRKTLQVLHAIRDNLPL
KDVRPPQAGQFLRLRQEMEEAFEQTFPESLENLEELLRPVAYQFDHRLKLPRFNRDKEPV
LELRERAEAGLKDKELLNRTYQERLDKELGIIHKMGFDDYFLIVWDLLRFGRSRHYYMGM
GRGSAAGSLVAFALDITGIDPVKNNLLFERFLNEERYSMPDIDIDLPDVYRTEFLHYVRD
RYGSRHSAQIVTYSTFGAKQAIRDVFKRFGAAEYELTNITRKIGFRDDLASAYEKNLSFR
QIINSKLEYQKAFAIAKKIEGQPRQTSIHAAGIVMSDDDLTNHIPLKSGEDMMITQYDAG
AVEANGLLKMDFLGLRNLTFVQRMAEKLAEEKGINLDIRSIDLEDPETLALFATGRTKGI
FQFEQAGAINLLKRIKPARFEEIVATTSLNRPGASDYTENFIKRKYGKEAVDLIDPLVAP
ILEGTYGIMLYQEQVMQIAQVFAGFTLGKADLLRRAMSKKNQAEMQKMEADFLQGAKDLG
RNPATAKELFERMAKFAGYGFNRSHAFAYSALAFQLAYFKAHYPSIFYDVMLNYSSSDYI
SDALQADFKVGSLSINSVPYGDKISAGTIYMGMKNLKGFPRDLAYWIIEERPFSSIEDFL
TRLPENYQKADYIRPLIQIGLFDQFESNRRKLEENLEPLFTFVNELGSLFADSSYNWLES
EDYSPSQKYDLEMQWLGVGISPHPLVSLAKEVEGAYTPFDELIVNQQARVLGQIEIVRVI
RTKSKGEQMAFVTLTDTKQKLGVTVFPESYQKWRELLKEGQIFYMTGKVQERDGRLQLVL
QTIEAVTREKFWIQISNHAHDREIAKVLQAYPGQIPVILHYQEGNQTLQSKQLFVAKSDQ
LQKELTPYVMKTIYH
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcacccatagatactaagacagtctatagctttatggatagcttggttaatctc
aaatcttacgtaaaaagggccaaggaattgggttacagccatcttggcattatggaccaa
gacaatctttatggggcctatcattttgtagtagaagcaaaaaaagaagggttgcaagcg
gtgattggtctggaactatcttttagacttgatgatgagagtcccttaaccttacaattg
ctggctctagatacccgtggctaccagaacttgttaaaactttcgaccttaaaaatgagc
gagggtttgggactaaaggatttgcccaactatctatcggggctggctgttttagttcct
tattttgatgagattgattccctagaacttccttttgactactatattggagtgtttttg
gatagtccaaaacaagcctattccaaacccattttgcctctgcagactgttcgctattat
caggaagaggatcgtaagaccctgcaggttttacacgctatcagggataatttaccctta
aaagatgtcagaccaccccaagctggtcaattcctgcggttgcgtcaggagatggaagag
gcctttgagcagacctttccagaaagcctagaaaatttagaagagctcttgaggccagtt
gcttatcaatttgatcaccgactaaagctaccacgttttaatcgggataaagagcctgta
cttgaattgcgagaacgggcagaagctgggctaaaagacaaggagctcttgaatagaacc
taccaagagcggttggataaggaactcggtattatccataagatgggctttgacgattac
tttttgattgtctgggatctcctgcgttttggacgttctcgccactattatatgggaatg
gggcgggggtcagccgcgggtagcttggttgcttttgcccttgatattaccggcattgac
cccgttaaaaataatctactctttgaacgcttcctcaatgaagaacgttactctatgcca
gatattgatattgacctaccagatgtctaccggacagaatttcttcattatgtcagagat
cgttatggcagccgacattctgctcagattgtgacctattcaacctttggtgccaagcaa
gccattcgggacgttttcaaacgttttggagcagctgaatatgaattaaccaatatcacc
cgcaagattggttttcgggatgacttagcttctgcctatgaaaagaatttatccttccgt
cagattattaatagtaaactggagtatcagaaggcctttgccatcgctaagaagattgaa
gggcaaccgcgtcagacctcaatccatgcggctgggattgtcatgagtgatgacgacctg
accaatcatatcccgcttaagtctggcgaggatatgatgattactcagtatgatgctggt
gccgttgaggctaatggcctcttgaagatggattttctggggcttcgtaatctgaccttc
gttcaacggatggctgaaaaattggcagaagaaaaaggaatcaatttggatatcaggagt
attgaccttgaagaccctgaaactctggccctctttgcgactggtagaaccaagggtatc
ttccaatttgaacaggctggggccatcaaccttttgaagcgaatcaagccagcacggttt
gaagagattgttgctacaaccagccttaatcggccaggtgccagcgactatactgagaac
tttattaagcgaaagtatggtaaggaagctgttgacttgattgaccccttagttgcccca
attttggaaggaacctacggtattatgctctatcaggagcaagtcatgcagattgcccaa
gttttcgctggtttcacgctgggtaaggccgaccttttgcgccgagccatgtctaagaaa
aatcaggcagaaatgcagaaaatggaagccgactttctgcagggtgccaaggacttgggt
cgaaatccggccacagccaaggaactttttgagcgtatggccaaattcgctggctatggt
tttaaccgtagccatgcctttgcttattcagctctagcctttcaattggcctatttcaag
gcgcattacccttctattttttatgatgtcatgctcaattattccagctctgactatatc
agtgatgccctgcaggccgattttaaagtcgggagcttatccatcaatagtgttccctat
ggggataagatttctgctggcacaatatacatgggcatgaagaatctcaagggcttcccg
agagacctagcctactggattattgaagaaaggcctttttcctcaattgaagactttcta
acacgtctgccggagaattatcaaaaagccgactacatcaggcccctgattcagattggt
ctatttgatcagtttgagtccaatcgccgtaagctagaagagaatttagaacctcttttc
acctttgtcaatgaattaggcagcctctttgctgactcatcttataattggctggagtca
gaagattattctccgagtcagaagtatgatttagaaatgcagtggctgggtgttggcatc
agtccccatcccctagttagtctcgctaaggaagttgaaggagcctatactccttttgat
gaattgattgtcaatcagcaggcaagagtcttgggacaaattgaaatagttcgggtgatt
cgcactaaatctaaaggagagcagatggcttttgtaaccctaacagacaccaagcaaaag
ctgggtgtaacagtctttccagaaagttatcaaaagtggcgggaattgctaaaagaaggt
cagatcttttatatgacaggcaaggttcaagaaagggacggacgcttgcaattggtctta
cagacaattgaagccgtgacaagagagaaattttggattcaaatttcaaatcatgctcat
gatagggaaatcgctaaggttcttcaagcctacccagggcaaattcctgttatcttacac
taccaagaaggcaaccaaactttgcagagcaaacaattatttgtagcaaaatctgatcag
cttcaaaaagagctgacaccctatgttatgaaaacgatttatcactaa
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integrated database retrieval system
