Streptococcus sobrinus: DK181_06420
Help
Entry
DK181_06420 CDS
T05567
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ssob
Streptococcus sobrinus
Brite
KEGG Orthology (KO) [BR:
ssob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssob03016
]
DK181_06420
Enzymes [BR:
ssob01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DK181_06420
Transfer RNA biogenesis [BR:
ssob03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DK181_06420
Prokaryotic type
DK181_06420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AWN19084
LinkDB
All DBs
Position
complement(1292203..1293087)
Genome browser
AA seq
294 aa
AA seq
DB search
MINGIINLKKEAGMTSHDAVFKLRKILGEKKIGHGGTLDPDVTGVLPIAVGKATRVLEYM
TESGKVYEGQITLGYSTTTEDASGELVRETLLNQDQLTAEQVDLAMASFLGEITQIPPMY
SAVKVNGRRLYDYARTGESVERPQRQITISEFFRTSPLTFEDDLCRFDFRVACSKGTYVR
TLAVDLGTKLGIASHMSALRRTASAGLELGNAFSLAEIAEQVANDREDFLLPMEYGVLDL
PRVDLQEAQKTEISFGRFIRLDSQEDILAAFYEDRVQAILERRGYLYKPRKVLI
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgattaacggtattatcaacctcaaaaaggaagctggtatgaccagtcacgatgcggtt
tttaaactgcgaaaaattttaggcgaaaagaaaattggtcatggtggaacccttgatcct
gatgttacaggggtactgccgattgctgtcggcaaggcgactcgggttttggaatacatg
actgagagtggcaaggtctatgaaggccagataactctgggctattccaccacgaccgag
gatgctagtggggaactggttcgtgaaacgctcttgaaccaggaccaattgacggccgag
caggttgacctggcaatggctagctttctgggagagataactcaaattccgcccatgtat
tctgcggttaaggttaatggtcgcagactctacgactatgccaggacaggtgaaagtgtt
gagcggcctcaacgccagataaccatcagtgagttctttcggacatctcctttgactttt
gaggacgatctctgtcgttttgatttccgtgtagcctgtagcaaggggacctatgttcgg
actctggcggtcgatttggggactaagctggggatagccagtcatatgtcagctctaagg
cggacagcttcggcaggcttggagttgggaaatgcctttagcttagctgagattgccgag
caagtagcaaacgacagagaggactttctcctacctatggaatacggcgtccttgatttg
ccgagggtagacttacaggaagcgcagaagactgagatttccttcggtcgctttattaga
ctggattctcaagaagatatcttggcagccttctatgaggacagggttcaggccatttta
gaaagaaggggttacctttataaaccgcgaaaggttttaatctaa
DBGET
integrated database retrieval system
