Streptococcus sobrinus: DK181_06900
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Entry
DK181_06900 CDS
T05567
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ssob
Streptococcus sobrinus
Brite
KEGG Orthology (KO) [BR:
ssob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssob03400
]
DK181_06900
DNA repair and recombination proteins [BR:
ssob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DK181_06900
Archaeal homologous recombinant proteins
DK181_06900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
AAA_29
nSTAND3
SMC_N
ABC_tran
GP24_25
Motif
Other DBs
NCBI-ProteinID:
AWN19175
LinkDB
All DBs
Position
complement(1413487..1416663)
Genome browser
AA seq
1058 aa
AA seq
DB search
MKPIRIEMTNFGPYRQEVLDFSGLEDNHLFLISGRTGAGKSSIFDAMTYALYDKTSSDRP
VNELRSTFAGLTDPRTKVVFYFQHHNQLYRLERELDLKPRKGLDRGKGIGTSKASLAVVD
AVGGLELDKLAGKSKETNQAVVDLLGLTSEQFKQIILLPQYQFSQFLKSPTSEKLPILRQ
IFATQVFAKFEEDLVQKWSQAKQEQSQFQTALDAYFASQTWTIQEREAFAEASGDQGLSL
AQTRLKHYQSELEEAEKQKARAQKEAKQADQTYQVAQKLASQFQDRQAQEARYQTEILDQ
AEAYQKKQAKLAQLNFAASLADLVKEEKSKQATGRELENSIASLQADLTAGQRKLKPLEE
QLSRLQGQQAQVEASQAEIETLRLALNSAQTLAKEQSELQSAQASLTKLEKDQKDLAQQE
QQVQQTQANLQASLISDQDLFTLRSVKEEAQGLIAGDLATGLEKQVDLQEAGQKLAERRT
TSLGSQVQLEADLAVLQDRLKASKRDQLKLMVAKLQDELEDGSPCPVCGSLDHPGSQAGA
VDEGALANLSQRVENLEAELAQKQEALQAQQLEVSQLSSQLIDNKRFVQEQSQALEANYQ
TLQEKISAYLPDFIWEETYSQELGQKLKDQLKQSYQALFDRKAKQDQQLEGLAQNLANLN
QAQQKVQEGRASLSGQIKTLERSRKQLLQAHPDLQTPDYYEAEIAQRREAYQAFRQKFDS
CQKQVANQKEVLSGLEGGLSSQKESLQTIQADLDSLSQDLEARLADPAALTHDLSQLEAW
LAELADGQQVTLQTWLTKYQQNREQVEASLAQFNQLLADQEKPDLQALAQKKEAAELALN
QAASQLALSQHQLDQVEHLVTEIEQLLAQAGHHLEEFRQLSQLKNIISGTETGSQRLKLE
TYVIQAYLEEILTYANDHYIGLLSNRQFEFLIGKEEAGNSQSGLDINIYDRANNKELPAS
SLSGGETFIASLAIALSLSEVVQNTSNGALVETLFIDEGFGSLDEDTLDKAIAVLEQIGQ
NRLVGVISHVKEMKDTIQQQVLIDKGPDGSSRIRVKAD
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctatccggattgaaatgacaaattttggcccctatcgtcaggaagttctagat
ttttccggtctggaagataatcatctttttctgattagtggtcggacgggggcaggtaag
tccagcattttcgatgccatgacctatgctctttatgataagacctccagcgataggcct
gtcaatgaattgcggtcaaccttcgcagggcttacggaccctaggactaaggtagttttc
tatttccagcaccataaccagctctatcgtcttgagcgggagctagatttaaaaccgcgc
aagggcctggatcgcggtaagggaatcggaaccagcaaggccagtctggcggtcgtagat
gctgtcggtggtttggagcttgataagttagcaggcaagtccaaggagaccaaccaagcg
gtcgttgaccttctggggctgactagtgagcagttcaagcagattattcttttgccccag
taccagttcagtcagttcctcaagtcgcccaccagcgagaaacttccgattctgcgacag
atttttgcgactcaggtctttgccaaatttgaggaagatctggttcaaaaatggtcccag
gctaaacaggagcagagccagtttcaaacggctttagatgcctattttgccagccaaact
tggaccattcaagaaagggaagcatttgctgaagcaagtggcgaccaaggcttgagcttg
gcccagacccgccttaaacattatcagagtgaattggaagaggcagaaaagcaaaaggct
cgggctcaaaaggaggctaagcaggcagaccagacctatcaagtggcgcaaaaactggcc
agccaatttcaagaccgccaggctcaagaggcccgctaccaaactgaaattttggaccag
gctgaggcttatcaaaagaagcaagccaagctggcccagcttaattttgcagctagtttg
gctgatttggtcaaggaagaaaaaagcaagcaggctactggtcgtgagttggaaaattct
atagccagcttgcaggcagacttgacagcaggtcaaagaaaactaaaaccgctggaagag
caattatcccgcttgcagggacaacaggcccaggttgaggccagtcaggctgagattgag
actttgcgtctggctctaaatagtgcacagactctggctaaagagcagagcgaactgcag
tccgcccaagcctctctgactaaattagaaaaggaccagaaagatctggctcagcaagag
cagcaggtccagcagacccaggccaatttacaggctagtctgatttctgaccaggacctc
tttaccttaaggtcagtcaaagaggaggcccaggggctgatagctggtgacttggcgact
ggtctagaaaagcaggttgatttacaggaagcagggcagaagctcgctgagcgaagaacg
acgagcctgggaagtcaagtccagttagaagcggacctggctgttctgcaggatcggctt
aaggctagcaagcgggatcagctcaaattgatggtagccaagctccaggatgaattagag
gacggcagcccctgtccagtctgtggctcgctggatcatccaggtagtcaagctggagcg
gttgatgaaggagctttagccaatctctctcaaagggtagaaaatttggaagcagagctg
gcccagaagcaggaagctctgcaagcccagcagcttgaggtcagccaattaagcagtcag
ttgattgataataagagatttgttcaggaacaatctcaggccttagaggcaaattatcaa
accttgcaggaaaagatttctgcctaccttcctgactttatctgggaggaaacctatagc
caagaacttggtcaaaaattaaaggaccaacttaagcaaagctaccaggctctctttgat
aggaaggctaagcaggaccagcaattagaagggctggctcagaatctggccaatttgaac
caagcccaacaaaaggttcaagagggaagggcaagtttatctggccagattaaaacccta
gagcggagccgaaaacagctcctccaagcccatccagacttacagactccagattattat
gaggcagaaattgcccagagaagggaagcctaccaggccttccgccagaaatttgacagc
tgtcaaaagcaagtagctaaccaaaaggaggtcttgtccggcctagaaggaggtctgtct
agtcaaaaggaaagtttgcagaccattcaagccgatttggatagcctgagccaagacctt
gaggctagactagcagacccagccgccttgacccatgacctttcccaacttgaggcttgg
ttggctgagctagcagatggtcagcaagtgactctgcagacctggctgaccaagtaccag
caaaatcgcgagcaagtggaggccagtctggcccagttcaatcagcttctggctgaccag
gaaaaaccagacctgcaagcccttgcccagaaaaaagaagcagcggaattggctcttaat
caggcggctagccagttggctctcagccagcaccagctggatcaggttgagcacttggtg
acagagattgagcagcttctggctcaggccggtcaccatttggaagagtttcgccagtta
tcccagctcaaaaatatcattagcggaacagagacgggcagtcaacggctcaagctggaa
acctatgtcatccaggcctatttggaagagattctgacctatgccaacgaccattacata
ggcctcctcagcaatcggcagtttgaatttttgattggcaaagaggaggctggcaatagc
cagtcgggtctggatataaatatctatgaccgggccaataataaggagttgcccgcctcc
tcgctatcgggtggtgagacctttatcgcctccctggccattgctctctccctgtcggag
gtcgtgcaaaataccagcaacggggccttggttgaaaccctctttattgatgaaggtttc
ggttccttggacgaggacaccctagacaaggctattgctgttctggaacaaattggtcaa
aatcgtctagtcggtgtcatcagccacgtcaaggaaatgaaggacaccatccagcagcag
gtccttatcgacaagggaccggatggctcaagtcggattagggtgaaggcagactaa
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integrated database retrieval system
