Streptococcus sobrinus: DK181_07010
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Entry
DK181_07010 CDS
T05567
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
ssob
Streptococcus sobrinus
Pathway
ssob02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ssob00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DK181_07010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssob03021
]
DK181_07010
Transcription machinery [BR:
ssob03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DK181_07010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DprA_WH
DUF2316
Motif
Other DBs
NCBI-ProteinID:
AWN19196
UniProt:
A0ABM6W4X5
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All DBs
Position
complement(1443669..1444778)
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AA seq
369 aa
AA seq
DB search
MASKKTNTTFNVQVADFIRNHKKEGTAVDDEVTEKLVIPFVLDADQIDDLLERLTDGGIS
ITDKEGNPSSKYVVEAPKPEELTDEELLGSNSAKVNDPVRMYLKEIGVVPLLTNEEEKEL
AIAAAEGDLMAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQIA
ERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRIVLREQL
NEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRS
KQLKDFMED
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtaaaaaaacaaatacaacctttaacgtacaagttgctgactttatccgcaat
cataagaaagaaggaacggccgttgatgacgaagtaactgaaaaattggtcatccctttc
gtcctggatgctgaccaaattgatgatttattggaacgcttgaccgatggtggtatttcg
attactgacaaggagggaaatccctccagcaagtatgtggttgaagctcctaagccagaa
gaattgacagatgaggaattgctgggtagcaattctgccaaagttaatgaccctgtccgg
atgtatctcaaggaaattggtgtggtgcccctcttgaccaacgaggaagaaaaagagctg
gctattgccgctgcagaaggtgaccttatggccaagcagcgcctagctgaggccaattta
cgtctggtggtttccattgccaagcgttatgttggtcgtggtatgcagttccttgacttg
attcaagaagggaatatgggactgatgaaggccgttgataaatttgactactccaaaggt
ttcaagttttcgacttatgccacttggtggattcgccaagccatcactcgggccattgcc
gaccaagctcggactattcggattccagtccacatggttgaaaccatcaataaattggtg
cgtgagcaacgcaatcttctgcaagaattgggtcaagacccaacaccagaacagattgcc
gagcggatggatatgaccccagacaaggttcgtgaaatcctcaagattgctcaagagcct
gtttctctggaaactcctattggggaagaagatgacagtcatctgggtgatttcattgaa
gatgaagtcattgaaaatccggtagactataccactcggattgtcctgcgggagcagctc
aatgaagtcttggatactttgactgaccgggaagaaaatgttctccgtctgcgtttcgga
ctcgatgatggcaagatgcggaccctagaagatgtcggaaaggtcttcaacgttacccgt
gaacggattcgccaaatcgaagctaaggccctccgcaaacttcgccacccaagccgcagc
aaacaactcaaagactttatggaggactga
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