Streptococcus sobrinus: DK181_09375
Help
Entry
DK181_09375 CDS
T05567
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ssob
Streptococcus sobrinus
Pathway
ssob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DK181_09375 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssob03019
]
DK181_09375 (pnp)
03016 Transfer RNA biogenesis [BR:
ssob03016
]
DK181_09375 (pnp)
Enzymes [BR:
ssob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DK181_09375 (pnp)
Messenger RNA biogenesis [BR:
ssob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DK181_09375 (pnp)
Transfer RNA biogenesis [BR:
ssob03016
]
Prokaryotic type
tRNA degradation factors
DK181_09375 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
KH_2
S1_2
KH-I_KHDC4-BBP
SPATA25
Motif
Other DBs
NCBI-ProteinID:
AWN19616
LinkDB
All DBs
Position
complement(1909835..1912138)
Genome browser
AA seq
767 aa
AA seq
DB search
MAKQTFQMTFAGKPLVVEIGQVAKQANGAAVVRYGDSTVLCAATMSKKMATTDFFPLQVN
YEEKMYAAGKFPGGFMKREGRPSTDATLTARLIDRPIRPLFAQGFRNEVQVINTVLSYDA
DASAPMAAMFASSLALCISDIPFNGPIAGVQVAYLDGDFVINPSAQQKEDSSLELTVAGT
KEAINMVESGAKELSEEIMLEALPKGHQAIQELIAFQEEIVAAVGKEKAEVELLQVDPEL
EVEILASYNSDLQKAVQVEEKLAREEATQAVKDQVLAVYEERYADDDDLDRILRDVAEIL
EEMEHAEVRRLITEDKVRPDGRKVDEIRPLEAEVDFLPQVHGSGLFTRGQTQALSVLTLA
PMSESKIVDGLDPEYRKRFMHHYNFPQYSVGETGRYGAPGRREIGHGALGERALAQVLPS
LEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGSNYTI
LTDIQGLEDHFGDMDFKVAGTRQGITALQMDIKISGITPEILQEALAQAKKARFEILDLI
EATIPAPRPELAPTAPKIDTIKIAVDKIKVVIGKGGETIDKIIEETGVKIDIDEDGNVQI
YSPDQDAIDRVKKIIANLVREAKVGEIYQEAEVVRIESFGAFVNLFDKTDALVHISELAW
ERTNRVEDVVKLGDKVTVKVLKIDDKGRVNASIKALLPKPEGFDEQEPQKHHQKKHGHHA
SRKQSTVKKDSQRDHKSNRSHQERSDKQGDDQTGNHQEHQAKAQTND
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaaacctttcagatgacctttgctggtaagcccctagtggttgaaattggt
caggttgccaagcaggcaaatggtgcagcagtcgtgcgttatggggattcaacggtcctc
tgtgcagccaccatgtccaagaagatggcaacaactgacttctttcccctgcaggtcaat
tacgaggaaaagatgtatgcagcagggaaatttcctggtggctttatgaagcgcgaaggg
cgtccttcaaccgatgcaaccctaactgctcgtctcattgaccggcctattcggcccctg
tttgcccaaggctttcgtaatgaggttcaggtcatcaatactgtcctctcctatgatgcg
gatgcatcggctcccatggctgccatgtttgctagttcgctagccctctgtatttctgac
attccttttaatgggcccattgctggggttcaggttgcctatttggatggtgacttcgtc
attaatcctagtgcccagcaaaaagaagactccagtttggagctgacggttgcaggaacc
aaggaagccatcaatatggtggaatcaggtgccaaggagttatctgaagaaattatgctg
gaggccctgcccaagggccaccaagccattcaagaattgattgccttccaggaagaaatt
gtcgcagccgtcggcaaggaaaaggctgaggttgaactccttcaggttgaccctgagctt
gaggttgaaattctagcaagctacaatagcgacctgcaaaaggccgttcaggttgaagaa
aagttggcccgcgaagaagcgacccaagcggtcaaggaccaagtcttggctgtctatgag
gaacgctatgcggatgatgacgacttggaccgcatcctgcgggatgttgctgagatttta
gaagaaatggagcatgctgaggttcgtcgcctgattactgaggacaaggtccgtcctgat
ggccggaaggtcgatgaaattcgtcccttagaggctgaggttgattttcttccgcaagtg
cacggctctggtctctttacccgcgggcaaacccaggccctgtctgtcttgactctggct
cctatgagtgagagtaagattgttgatggtctggatcctgagtaccgaaaacgctttatg
caccattataatttccctcaatattctgtcggggaaacgggccgttacggagctcccggc
cgtcgtgaaatcggtcatggagcccttggtgagcgtgccttggcgcaggttctgccaagc
ctagaagaattcccttatgctattcgtttggtggcggaagttctggagtcaaatgggtct
tcatcccaagcttctatctgtgcaggaacactggctctgatggctggcggggtaccgatt
aaagcacctgtcgccggaattgccatgggcttgatttcagatggcagcaactacactatt
ttgaccgatattcaaggacttgaagatcactttggtgatatggacttcaaggtagctggc
acccgccaagggataaccgccctgcagatggatattaagatttccggcattaccccagaa
attcttcaagaggctctggctcaggccaagaaggcccgctttgaaattctggatttgatt
gaggcgaccattccagcccctcggcctgaattggccccaaccgctcctaagattgatacc
atcaagattgctgtcgataaaatcaaggtggtcatcggtaagggtggcgaaactattgat
aaaatcattgaagagacgggtgtcaagattgacatcgatgaagacggaaatgtccaaatc
tactcgcctgaccaagatgctattgaccgagtaaagaaaatcattgccaacctagtgcgt
gaagccaaggtcggtgaaatctaccaggaggctgaagttgttcgtattgaaagcttcggt
gcctttgtcaatctctttgataagactgatgccctagttcacatctcagaattagcctgg
gagcggaccaatcgggtcgaagatgtagtcaaactgggtgataaggtcaccgtcaaggtt
ctcaagattgatgataagggtcgggttaatgcttccatcaaggccctcttgccaaaacca
gaaggttttgatgagcaggagccccaaaagcaccatcaaaagaaacatggccaccatgca
tcaagaaaacagtcaacagtcaaaaaagatagccagagggaccacaagtccaaccgcagt
caccaagagcggtctgataagcaaggtgatgaccaaacaggtaatcaccaagaacatcag
gccaaggctcagactaacgactaa
DBGET
integrated database retrieval system
