Streptomyces solicamelliae: ABZO31_05075
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Entry
ABZO31_05075 CDS
T11072
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ssoc Streptomyces solicamelliae
Pathway
ssoc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ABZO31_05075 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssoc03400
]
ABZO31_05075 (ruvB)
Enzymes [BR:
ssoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABZO31_05075 (ruvB)
DNA repair and recombination proteins [BR:
ssoc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABZO31_05075 (ruvB)
RecFOR pathway proteins
ABZO31_05075 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
Mg_chelatase
DUF815
nSTAND3
Sigma54_activat
AAA_14
AAA_3
Sigma54_activ_2
RNA_helicase
AAA_28
Zeta_toxin
TsaE
AAA_18
AAA_19
AAA_25
NTPase_1
NPHP3_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
XCW01229
LinkDB
All DBs
Position
complement(1100897..1101970)
Genome browser
AA seq
357 aa
AA seq
DB search
MNWDDETDPGTSAERLVGAAADGEDQAVEAALRPKDLSEFVGQEKVRQQLDLVLKAARQR
GATADHVLLSGAPGLGKTTLSMIIAAEMNAPIRITSGPAIQHAGDLAAILSSLQEGEILF
LDEIHRMSRPAEEMLYMAMEDFRVDVIVGKGPGATAIPLELPPFTLVGATTRAGLLPPPL
RDRFGFTAHMEFYDPGELQRVIHRSAGLLDVEIDTDGAAEIAGRSRGTPRIANRLLRRVR
DYAQVRADGRITREIAAAALGVYEVDARGLDRLDRAVLEALLKLFGGGPVGLSTLAVAVG
EERETVEEVAEPFLVREGLLARTPRGRVATPAAWTHLGLTPPQAAAPGNGQQGLFGA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
gtgaactgggacgacgagacggaccccggcaccagcgcagagcgcctcgtcggcgccgcc
gccgacggcgaggaccaggccgtcgaggccgccctgcgcccgaaggacctcagcgagttc
gtcggccaggagaaggtccgccagcagctcgacctggtcctcaaggccgcccgtcaacgc
ggcgccaccgccgaccacgtcctgctctccggcgcaccagggctcggcaagaccaccctc
tccatgatcatcgccgcggagatgaacgccccgatccggatcacctccggccccgccatc
cagcacgccggcgacctcgccgcgatcctctcctccctccaggagggcgagatcctcttc
ctcgacgagatccaccggatgtcccggcccgccgaggaaatgctctacatggcgatggag
gacttccgcgtcgacgtcatcgtcggcaagggccccggcgccaccgccatcccgctggag
ctgccgcccttcacgctggtcggcgcgaccacccgggccggcctgctgccgcccccgctg
cgcgaccgcttcggcttcaccgcacacatggagttctacgacccgggcgagctccagcgc
gtgatccaccgctccgccggcctgctcgacgtcgagatcgacaccgacggcgccgccgag
atcgccggccgctcccgcggcacgccccgtatcgccaaccggctgctccgccgcgtccgc
gactacgcgcaggtcagggccgacggccggatcacccgcgagatcgccgccgcggccctc
ggggtgtacgaggtggacgcccgcgggctggaccggctggaccgcgcggtcctggaggcc
ctgctgaagctgttcggcggcggaccggtcggcctgtcgaccctcgccgtggctgtgggg
gaggagcgcgagacggtcgaggaggtcgccgagcccttcctcgtacgcgagggtctgctg
gcccgtacgccccgtggtcgcgtcgccactccggcggcctggacccacctcggactgacg
ccgccgcaggcggccgcaccgggaaatggacaacaggggctcttcggggcgtga
DBGET
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