Streptomyces solicamelliae: ABZO31_06840
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Entry
ABZO31_06840 CDS
T11072
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ssoc Streptomyces solicamelliae
Pathway
ssoc03030
DNA replication
ssoc03430
Mismatch repair
ssoc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABZO31_06840
03430 Mismatch repair
ABZO31_06840
03440 Homologous recombination
ABZO31_06840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssoc03032
]
ABZO31_06840
03400 DNA repair and recombination proteins [BR:
ssoc03400
]
ABZO31_06840
Enzymes [BR:
ssoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABZO31_06840
DNA replication proteins [BR:
ssoc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABZO31_06840
DNA repair and recombination proteins [BR:
ssoc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABZO31_06840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
PTCB-BRCT
AP_endonuc_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
XCW01548
LinkDB
All DBs
Position
1472190..1473173
Genome browser
AA seq
327 aa
AA seq
DB search
MTMLDDRTTAAAWPAAYPQGYAVVDVETTGLARDDRIVSAAVYRLDAHGNVEDHWYTLVN
PERDPGPVWIHGLTTDMLADAPLFPDVAAEFSERLDGRVLVAHNAIFDWGMIAREYARAE
RTAPVRQRLCTIALAKELALPLPNLKLESLAAHFGVVQQRAHNALDDARVLAEAFRPSLH
AAAERGVRLPLLECRPLTEWVSSPATGAGTARIGRQSSYGNSWRPTKKRPPCPHPNPGRY
EADKPLKQGMRVAFSGDTSIDRELLEDRTVEAGLHVASSVSRLTSLLVTNDPDSATSKTV
KAKSYGTPIVDEAAYTHLLRDVAPADG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgctcgacgaccgtacgaccgcagcagcgtggccggccgcatacccgcagggg
tacgcggtcgtcgacgtggagaccaccggactcgcccgcgacgaccggatagtgtcggct
gccgtctaccggctggacgcccacggcaacgtcgaggaccactggtacaccctcgtcaac
ccggagcgggatcccggcccggtctggatccacgggctgaccaccgacatgctggcggac
gcgccgctcttcccggacgtggcggcggagttctccgagcggctggacggccgggtgctg
gtggcgcacaacgcgatcttcgactggggcatgatcgcccgcgagtacgcgcgcgccgag
cggacggcgccggtgcggcagcggttgtgcaccatcgcgctcgccaaggagctggcgctg
ccgctgcccaacctcaagctggagtccctggcggcccacttcggcgtcgtgcagcagcgc
gcgcacaacgcgctggacgacgcgcgggtgctcgccgaggcgttccggccgagcctgcac
gcggcggcggagcggggcgtacggctgccgctgctcgagtgccggccgctgacggagtgg
gtgtcctcgcccgcgaccggggccgggacggcgcggatcggccggcagtcctcgtacggg
aacagctggcgcccgacgaagaagcggccgccgtgcccgcatcccaaccccgggcgttac
gaagcagacaaaccactcaagcagggcatgcgggtggcgttctcgggcgacacctccatc
gaccgcgagctgctggaggaccgcacggtcgaggcgggactgcacgtcgcgagcagtgtg
tcccggctcaccagcctgctggtcaccaacgacccggactcggccacctcgaagaccgtc
aaggccaagtcgtacggcacgccgatcgtcgacgaggccgcgtacacacacctgctgagg
gacgtggccccggcagacgggtga
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