Streptomyces solicamelliae: ABZO31_08050
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Entry
ABZO31_08050 CDS
T11072
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ssoc Streptomyces solicamelliae
Pathway
ssoc03030
DNA replication
ssoc03430
Mismatch repair
ssoc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABZO31_08050 (dnaE)
03430 Mismatch repair
ABZO31_08050 (dnaE)
03440 Homologous recombination
ABZO31_08050 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssoc03032
]
ABZO31_08050 (dnaE)
03400 DNA repair and recombination proteins [BR:
ssoc03400
]
ABZO31_08050 (dnaE)
Enzymes [BR:
ssoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABZO31_08050 (dnaE)
DNA replication proteins [BR:
ssoc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABZO31_08050 (dnaE)
DNA repair and recombination proteins [BR:
ssoc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABZO31_08050 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HHH_3
Motif
Other DBs
NCBI-ProteinID:
XCW01772
LinkDB
All DBs
Position
complement(1727686..1731225)
Genome browser
AA seq
1179 aa
AA seq
DB search
MTKPPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMTHIAMSDHGNLHGAYDFFHSAKKA
DVTPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTIWAANATGLHNLFRL
SSDAYAEGWLQKWPRMDKETIAQWSEGLIASTGCPSGELQTRLRLGQFDEALKSASEYQD
IFGKDRYFLELMDHGIEIERRVRDGLLEIGKKLGIPPLVTNDSHYTYAHEATAHDALLCI
QTGKNLSDPDRFKFDGTGYYLKSTDEMYAIDSSDAWQEGCANTLLVAQQIDTTGMFEAKN
LMPKFDIPEGFTEVTWFREETMRGMARRFPNGIPDDRMKQVEYEMDTIISMGFPGYFLVV
ADFIMWAKKQGIAVGPGRGSAAGSIVAYAMGITDLDPIPHGLIFERFLNPERISMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLDGITNPAHPRYSEAGEIRGMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSEPIVDHAPIWVRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDAVKMVKA
NKGIELDLLALPLDDPKTFELLQRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMNSHTNYALRKNKQQEITPIHPELEEPLKEVLDVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPDELAKNFTIFQAGAQKNGYSDAAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTAYLKANYPAEYMAGLLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNES
ESNFAAQGDDVILFGLTAVRNVGSNVVESIIKSRKAKGKYASFPDFLDKVEAVVCNKRTI
ESLIKAGAFDTMGHTRKGLVAQHEPMIDNVVAVKRKEAEGQFDLFGGMGEEDTSEPGFGL
DVTFTEDEWEKSYLLAQEREMLGLYVSDHPLFGLEHVLSDKTDAGIQQLTGGEHADGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDAVVFVKGRL
DKREDVPRLVAMELMVPDLSNAGTNAPVILTIPALKVTPPMVSRLGEILSHHKGNTEVRI
KLQGPRSTTVLRLDRHRVQPDPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaagccgcccttcacgcacctccacgtccacacccagtactcgctgctggacggt
gccgcgcggctgaaggacatgttcaacgcgtgcaacgagatgggcatgacccatatcgcc
atgtccgaccacggcaacctgcacggcgcgtacgacttcttccacagcgccaagaaggcc
gacgtcacgccgatcatcggcatcgaggcctacgtcgcccccgagtcccggcggaacaag
cggaagatccagtggggccagccgcaccagaagagggacgacgtctccggttccggcggt
tacacccacaagaccatctgggcggcgaacgccaccggactgcacaacctcttccggctg
tcctccgacgcctacgccgagggctggctgcagaagtggccccggatggacaaggagacc
atcgcccagtggtcggagggcctgatcgcctccaccggctgcccctccggcgagctgcag
acccggctccgcctcggccagttcgacgaggccctgaagtccgcctccgagtaccaggac
atcttcggcaaggaccggtacttcctggagctgatggaccacggcatcgagatcgagcgc
cgggtccgcgacggcctgctcgagatcggcaagaagctcggcatcccgccgctggtcacc
aacgactcgcactacacctacgcgcacgaggccaccgcccacgacgccctgctctgcatc
cagaccggcaagaacctctccgacccggaccgcttcaagttcgacggcaccggctactac
ctgaagtccacggacgagatgtacgccatcgactcctcggacgcctggcaggagggctgc
gccaacacgctcctggtggcccagcagatcgacaccaccggcatgttcgaggcgaagaac
ctcatgccgaagttcgacatccccgagggcttcaccgaggtcacctggttccgcgaggag
accatgcggggcatggcgcgccggttccccaacgggatcccggacgaccgcatgaagcag
gtcgagtacgagatggacaccatcatctcgatgggcttcccgggttacttcctcgtcgtc
gccgacttcatcatgtgggccaagaagcagggcatcgccgtgggccccggccgaggctcc
gcggccggctcgatcgtcgcgtacgccatgggcatcaccgacctcgacccgatcccgcac
ggcctgatcttcgagcgcttcctcaaccccgagcgcatctcgatgcccgacgtcgacatc
gacttcgacgagcgcaggcgcgtcgaggtgatccggtacgtgaccgagaagtacggcgcc
gacaaggtcgccatgatcggcacctacggcaagatcaaggccaagaacgcgatcaaggac
tccgcccgcgtcctcggctacccgtacgccatgggcgaccggctcaccaaggcgatgccc
gccgacgtcctcggcaagggcatcgacctcgacggcatcaccaaccccgcccacccgcgc
tacagcgaggccggcgagatccgggggatgtacgagaacgagccggacgtgaagaaggtc
atcgacaccgccaagggcgtcgagggcctcgtccgccagatgggcgtccacgccgcaggc
gtgatcatgtccagcgaacccatcgtcgaccacgccccgatctgggtgcggcacaccgac
ggcgtcaccatcacgcagtgggactacccgcagtgcgagtcgctcggcctgctgaagatg
gacttcctgggcctgcggaacctgaccatcatggacgacgccgtcaagatggtgaaggcc
aacaagggcatcgagctcgacctcctcgccctgccgctggacgacccgaagaccttcgaa
ctgctccagcgcggtgacaccctcggcgtcttccagttcgacggcggccccatgcggtcc
ctgctgcggctgatgaagcccgacaacttcgaagacatctccgccgtgtccgccctgtac
cggccgggcccgatgggcatgaactcgcacacgaactacgccctgcgcaagaacaagcag
caggagatcactccgatccacccggagctggaggagcccctcaaggaggtcctcgacgtc
acctacggcctgatcgtgtaccaggagcaggtgcagaaggccgcccagatcatcgccggc
tactccctcggcgaggccgacatcctccgccgcgtcatgggcaagaagaagcccgacgag
ctggccaagaacttcaccatcttccaggccggcgcccagaagaacggctacagcgacgcg
gccatccaggccctgtgggacgtgctggtcccgttcgccggctacgccttcaacaaggcg
cactccgccgcgtacggcctggtctcctactggaccgcctacctcaaggcgaactacccc
gccgagtacatggcggggctgctgacctcggtcaaggacgacaaggacaagtccgcggtc
tacctgaacgagtgccgccgtatgggcatcaaggtgctcccgccgaacgtgaacgagtcg
gagtcgaacttcgccgcccagggcgacgacgtgatcctcttcggcctcaccgccgtccgg
aacgtcggttccaacgtcgtcgagtcgatcatcaagagccgcaaggcgaaggggaagtac
gcctccttcccggacttcctcgacaaggtcgaggcggtcgtctgcaacaagcgcaccatc
gagtcgctgatcaaggccggcgccttcgacaccatgggccacacccgcaagggcctggtc
gcccagcacgagccgatgatcgacaacgtggtggcggtcaagcgcaaggaggccgaggga
cagttcgacctgttcggcggcatgggcgaggaggacaccagcgagcccggcttcggtctc
gacgtcaccttcaccgaggacgagtgggagaagtcctacctgctcgcgcaggagcgcgag
atgctcggcctgtacgtctccgaccacccgctcttcggcctggagcacgtgctctccgac
aagaccgacgccggcatccagcagctcaccggcggcgagcacgcggacggcgcggtcgtc
accatcggcggcatcatctccggcctccagcgcaagatgaccaagcagggcaacgcctgg
gccatcgccaccgtggaggacctggccggctcgatcgagtgcatgttcttcccggccacg
taccagctggtctcgacccagctcgtcgaggacgcggtggtcttcgtcaagggccgcctc
gacaagcgcgaggacgtgccccggctcgtcgccatggagctgatggtccccgacctgtcg
aacgccgggaccaacgcgccggtgatcctcaccatccccgccctgaaggtcaccccgccg
atggtcagccgcctcggtgagatcctcagccaccacaagggcaacaccgaggtgcggatc
aagctccagggcccccggagcaccacggtcctccggctcgaccggcaccgcgtccagccg
gacccggcgctcttcggcgacctgaaggtgctgctcggcccgtcctgcctggccggctga
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