KEGG   Streptomyces solicamelliae: ABZO31_10075
Entry
ABZO31_10075      CDS       T11072                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
ssoc  Streptomyces solicamelliae
Pathway
ssoc02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ssoc00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    ABZO31_10075
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ssoc03021]
    ABZO31_10075
Transcription machinery [BR:ssoc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ABZO31_10075
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 LexA_DNA_bind HTH_28 KORA
Other DBs
NCBI-ProteinID: XCW02148
LinkDB
Position
complement(2161736..2162821)
AA seq 361 aa
MQTRTLTPADAVPEQRRAPQQEQQPERPAPPEGPAPEELAEEAPEPEPVPRRPELAGSGP
TGDLFRQYLREIGRIPLLTAEEEVELARRVEAGLFAEEKLARTPDLDSRLAHDLDRLVVM
GRMAKRRLIEANLRLVVSVAKRYVGRGLTMLDLVQEGNLGLIRAVEKFDYARGYKFSTYA
TWWIRQAMSRALADQARTIRVPVHVVELINRVIRVQRRMLQERGYEPTPEEVAAQLDLVP
ERVSEVLRLAQEPVSLHAPVGEEEDVALGDLIEDGDAASPVESAAFLLLREHLDAVLSTL
GERERKVVQLRYGLDDGRPRTLEEIGRLFGVTRERIRQIESKTLNKLRDHAFADQLRGYL
D
NT seq 1086 nt   +upstreamnt  +downstreamnt
gtgcagacccggaccctcaccccggcggacgccgtgcccgagcagcgcagagcgccgcag
caggagcagcagccggagcggcccgcgcctcccgaggggccggcgcccgaagaactggcc
gaggaggccccggagcccgagccggtgccgcggcgtcccgagctcgccgggagcgggccg
accggcgacctgttccggcagtacctgcgcgagatcggccggatcccgctgctcaccgcg
gaggaggaggtcgagctggcccgccgggtcgaggccggtctgttcgccgaggagaagctc
gctcgcaccccggacctggactcgcgcctggcgcacgacctggaccggctggtcgtcatg
ggccggatggcgaaacgccggctgatcgaggcgaacctgcggctcgtggtctccgtcgcc
aagcggtacgtgggccgcggcctgaccatgctcgacctggtgcaggagggcaatctcggc
ctgatccgggcggtggagaagttcgactacgcccgcggctacaagttctccacgtacgcg
acctggtggatccggcaggcgatgtcccgggcgctggccgaccaggcccgcaccatccgc
gtcccggtgcatgtggtggagctgatcaaccgggtgatccgggtgcagcgccggatgctg
caggagcgggggtacgagcccacgcccgaagaggtcgccgcccagctcgacctggtgccc
gagcgggtgagcgaggtgctgcggctggcgcaggagccggtgtcgctgcacgcgccggtc
ggcgaggaggaggacgtcgccctcggcgacctgatcgaggacggcgacgccgcgtccccg
gtggagtccgccgccttcctgctgctgcgggagcatctggacgcggtgctctccacgctc
ggcgagcgggagcgcaaggtcgtccagctgcgctacgggctggacgacgggcggccccgc
accctggaggagatcggacggctcttcggcgtgacgcgcgaacgcatccgccagatcgag
tccaagaccctcaacaagctgcgggaccacgccttcgccgaccagctccgcggctacctc
gactga

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