Streptomyces solicamelliae: ABZO31_11415
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Entry
ABZO31_11415 CDS
T11072
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ssoc Streptomyces solicamelliae
Pathway
ssoc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ABZO31_11415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssoc03400
]
ABZO31_11415
Enzymes [BR:
ssoc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ABZO31_11415
DNA repair and recombination proteins [BR:
ssoc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABZO31_11415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
Helicase_RecD
TraI_hel_assoc_N
AAA_16
PhoH
NPHP3_N
PIF1
nSTAND3
HTH_IclR
UvrD_C
DEAD
AAA
TrwB_AAD_bind
ATPase_2
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
XCW02400
LinkDB
All DBs
Position
complement(2479370..2481592)
Genome browser
AA seq
740 aa
AA seq
DB search
MAVLEGVLERITYANEENGYTVARVDTGRGGGDLLTVVGSLLGAQPGESLRMEGRWGSHP
QYGRQFTVENYTTLLPATIQGIRRYLGSGLVKGIGPVFADRITSHFGLETLDIIEQEPAR
LIEVPGLGPKRTKKIAAAWEEQKAIKEVMVFLQTVGVSTSIAVRIYKKYADASISVVKNQ
PYRLAADVWGIGFLTADRIAQAVGIPHDSPDRVRAGIQYALSQSTDQGHCFLPEEQLISD
AVKLLQVDTGLVIDCLGELAEDPEGVVREKVPGPDGQPVTAVYLVPFHRAELSLAAQVLR
LLRTPEDRLPGFADVDWGRALDWLARRTGATLAPEQEEAVRLALTRRVAVLTGGPGCGKS
FTVRSVVELARAKKAKVVLAAPTGRAAKRLAELTGAEASTVHRLLELKPGGDAAYDRDRP
LDADLVVVDEASMLDLLLANKLVKAVAPGAHLLLVGDVDQLPSVGAGEVLGDLLAPDSPV
PAVRLTRIFRQAQQSGVVTNAHRINAGQHPLTTGLPDFFLFAEDETEDAGRLAVEVAARR
IPAKFGLDPRRDVQVLAPMHRGPAGAGTLNGLLQQAITPARPDLPEKRFGGRVFRVGDKV
TQIRNNYDKGANGVFNGTVGVVTALDPEEQRLTVRTDEDEEIPYDFDELDELAHAYAVTI
HRSQGSEYPAVVIPITTGAWMMLQRNLLYTAVTRAKKLVVLVGSRKAIGQAVRTVSAGRR
CTALAHRLGGLSPTGAKGAG
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgctcgaaggcgtgctcgagcggatcacgtacgccaacgaggagaacgggtac
accgtcgcccgcgtcgacaccgggcgtggcggcggtgacctcctgacggtggtcggttcg
ctgctcggggcccagccgggcgagtcgctgcggatggagggccggtggggctcccatccg
cagtacggcaggcagttcaccgtcgagaactacacgaccctcctgcccgccacgatccag
ggcatccgccgctatctgggctccgggctcgtgaagggcatcgggccggtcttcgccgac
cgcatcaccagccacttcgggctcgagaccctggacatcatcgagcaggaaccggcccgt
ctgatcgaggtgcccggcctcgggccgaagcggacgaagaagatcgccgccgcctgggag
gagcagaaggccatcaaggaggtgatggtcttcctgcagaccgtcggcgtctccacctcc
atcgcggtgcggatctacaagaagtacgcggacgcctcgatctccgtggtgaagaatcag
ccctaccggctggccgccgacgtctggggcatcggcttcctcaccgccgaccggatcgcc
caggcggtcggcataccgcacgacagccccgaccgggtccgggccggcatccagtacgcc
ctgtcgcagtccaccgaccaggggcactgcttcctgcccgaggagcagctgatctccgac
gcggtgaagctgctccaggtggacaccggcctggtcatcgactgcctcggcgagctggcc
gaggacccggagggcgtggtgcgggagaaggtgccggggcccgacgggcagccggtcacg
gccgtgtacctggtcccgttccaccgggccgaactctccctcgccgcccaggtgctgcgc
ctgctgcgcacccccgaggaccggctgccgggcttcgccgacgtggactggggccgcgcc
ctggactggctggcccggcgtacgggtgccacgctcgcgcccgagcaggaggaggccgtc
cggctggccctgacccgcagggtcgcggtgctcaccggcggcccgggctgcggcaagtcg
ttcacggtccgctccgtggtggagctggcccgcgccaagaaggccaaggtggtgctcgcc
gcgcccaccggccgggccgccaagcggctggccgagctcaccggagcggaggcctccacc
gtccaccgcctcctggagctcaagcccggcggcgacgccgcgtacgaccgggaccggccg
ctggacgcggacctggtcgtcgtcgacgaggcgtcgatgctggacctgctgctcgcgaac
aagctggtcaaggcggtggctccgggcgcgcatctgctcctggtcggcgacgtggaccag
ctgccgtcggtcggcgccggcgaggtgctgggcgatctgctggccccggacagtccggtg
cccgccgtccggctgacccggatcttccggcaggcccagcagtccggcgtggtcaccaac
gcgcaccggatcaacgcggggcagcacccgctcaccaccggcctgccggacttcttcctc
ttcgccgaggacgagacggaggacgccggccggctcgcggtggaggtcgcggcccgccgg
atccccgcgaagttcggcctcgacccgcgccgggacgtccaggtcctcgccccgatgcac
cgcggcccggccggcgcggggacgctcaacggtctgctccagcaggccatcaccccggcc
cgccccgacctgcccgagaagcgcttcggcggccgggtcttccgcgtcggcgacaaagtc
acccagatccgtaacaactatgacaagggagcgaacggcgtcttcaacggcaccgtcggg
gtggtcaccgcgctcgacccggaggagcagcggctgaccgtccgcacggacgaggacgag
gagatcccgtacgacttcgacgagctggacgagctggcccatgcctacgctgtgaccatc
caccgttcgcagggcagcgagtaccccgcggtcgtgatcccgatcaccacgggggcctgg
atgatgctccagcggaacctgctctacaccgccgtgacccgggcgaagaagctggtcgta
ctggtcggctcgcgcaaggcgatcggtcaggcggtacgcacggtctcggcgggccggagg
tgtacggcactcgcccatcggctcggcggactttccccaaccggggcgaagggggcagga
tga
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