Streptomyces solicamelliae: ABZO31_12870
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Entry
ABZO31_12870 CDS
T11072
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
ssoc Streptomyces solicamelliae
Brite
KEGG Orthology (KO) [BR:
ssoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssoc03021
]
ABZO31_12870
Transcription machinery [BR:
ssoc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABZO31_12870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_24
HTH_3
MarR_2
DUF8073_C
GerE
DUF7343
MarR
HTH_31
HTH_28
Motif
Other DBs
NCBI-ProteinID:
XCW02657
LinkDB
All DBs
Position
2797482..2798369
Genome browser
AA seq
295 aa
AA seq
DB search
MSPRLDASRSPHAPSTTPTAPADLAELTENELAEIPPFEQIDPLDARALSKTLFARLEAL
EEGTHEYAYVRNTLVELNLALVKFAASRFRTRSEPMEDIVQVGTIGLIKAIDRFDLSRGV
EFPTFAMPTIIGEIKRFFRDTSWSVRVPRRLQELRLDLARAGDELAQRLDRAPTVEELAT
ELDLSHEEVVEGMAASNAYTASSLDAQPDEDETEGTLADRIGYEDHGLEGIEYVESLKPM
IAALPARDRKILSLRFTAGMTQSEIGEELGISQMHVSRLLARTLGRLRKGLTLEE
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacgcctcgcgttccccccacgcgccgtcgacgactcccaccgcc
cccgcggatctcgcggagctcaccgagaacgagctcgccgagatcccgccgttcgagcag
atcgacccgctcgacgcgcgcgcactgtcgaagaccctcttcgcccggctcgaagcgctc
gaagagggcactcacgagtacgcctacgtccgcaacaccctcgtcgaactcaacctcgcc
ctggtcaagttcgccgcctcccggttccgcacccgcagcgagcccatggaggacatcgtc
caggtcggcaccatcggcctgatcaaggccatcgaccgcttcgacctcagccgcggcgtc
gagttcccgacgttcgcgatgccgaccatcatcggcgagatcaagcgcttcttccgtgac
acctcctggtccgtccgcgtcccgcgccggctccaggaactccgcctcgacctggcccgg
gccggcgacgaactcgcccagcggctcgaccgcgcgcccaccgtcgaggaactggccacc
gaactggacctctcccacgaggaggtcgtcgagggcatggcggcgagcaacgcgtacacc
gcgagctcgctcgacgcccagccggacgaggacgagaccgagggcaccctcgccgaccgc
atcggctacgaggaccacggcctcgagggcatcgagtacgtcgagtccctcaagccgatg
atcgcggcgctgcccgcccgcgaccggaagatcctgtcgctgcgcttcaccgccggcatg
acgcagtccgagatcggcgaggaactgggcatctcgcagatgcacgtctcacgcctgctc
gcccgcaccctcggccggctgcggaagggcctgaccctggaggagtga
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