Streptomyces solicamelliae: ABZO31_16070
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Entry
ABZO31_16070 CDS
T11072
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
ssoc Streptomyces solicamelliae
Brite
KEGG Orthology (KO) [BR:
ssoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssoc03021
]
ABZO31_16070
Transcription machinery [BR:
ssoc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABZO31_16070
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
MarR_2
GerE
NirdL-like_HTH
HTH_24
HTH_3
DUF134
MarR
HTH_11
DUF7343
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
XCW03231
LinkDB
All DBs
Position
3457589..3458449
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AA seq
286 aa
AA seq
DB search
MPASTAPQVPPQPESSGEQEPDAPRPRERERSSRGADTRALTQVLFGQLKNLEPGTPEHD
RIRGALIEANLPLVRYAAARFRSRNEPMEDVVQVGTIGLINAIDRFDPDRGVQFPTFAMP
TVVGEIKRYFRDNVRTVHVPRRLHELWVQVNGATEDLTTAHGRSPTTAEIAERLKIGEDE
VLACIEAGRSYHATSLEAAQEGDGLPGLLDRLGYEDPALAGVEHRDLVRHLLVQLPEREQ
RILMLRYYSNLTQSQISQELGVSQMHVSRLLARSFARLRSANRIEA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgccggccagtactgcgcctcaggtgccgccccagcccgagtcctcgggcgagcaggag
cccgacgccccccgaccgcgggagcgcgagcgcagcagccgtggggccgacacccgggcg
ctcacccaggtgctcttcgggcagctgaagaacctggagccgggcacccccgagcacgac
cggatccgcggcgcgctgatcgaggccaacctgcccctggtgcggtacgcggcggcccgc
ttccgctcccgcaacgagccgatggaggacgtcgtccaggtcggcaccatcggcctgatc
aacgccatcgaccggttcgacccggaccggggcgtgcagttcccgaccttcgccatgccg
accgtcgtcggcgagatcaagcggtacttccgcgacaacgtgcgcaccgtccacgtaccg
cggcgcctccacgagctctgggtccaggtcaacggcgccacggaggacctgaccaccgcc
cacgggcgctcccccaccaccgccgagatcgccgagcgcctgaagatcggcgaggacgag
gtgctggcctgcatcgaggccggccgctcgtaccacgccacctccctcgaggcggcccag
gagggcgacgggctgcccggactgctcgaccggctcggctacgaggaccccgcgctcgcc
ggcgtcgaacaccgcgacctcgtccggcacctgctcgtccaactccccgagcgggagcag
cgcatcctgatgctccgttactacagcaatctgacccagtctcagatcagccaggaactc
ggggtttcgcagatgcacgtgtcaaggctcctcgcccgcagcttcgcccggttgagatcc
gcaaatcggatcgaggcatag
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