Streptomyces solicamelliae: ABZO31_16170
Help
Entry
ABZO31_16170 CDS
T11072
Name
(GenBank) PAS domain-containing protein
Organism
ssoc Streptomyces solicamelliae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
PAS_4
PAS_8
Response_reg
Diguanyl_cycl_sensor
DUF4694
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
XCW03249
LinkDB
All DBs
Position
3475699..3479907
Genome browser
AA seq
1402 aa
AA seq
DB search
MSSRPSRGAARLAAILDALPDGLVLVNCNGTVVNANTIALGLFESPGTALVGRGLLDLLP
EFDSRLIPGSMRRPDAADDRGRTKPARMIARRTDGSEFPVEVTSASLEDGREAYDSHSSY
TGDELLMLVVRDLTGTVDTEAELARSQRQTEMILRAASEGVVGTDTDGRVVLVNPAAAQI
LGFRAGDLGGKELHPLILHSRPDGEPFPYAESPLADTLRSGRKHRVRGQVLWAKDGSKVP
VDLTTAPVRDGDQLVGAVMTFTDRRPYEQMEEERAAELTAREERHAAELSERDERHAAEL
AEREERAAGELAERQERLDELEQRHTELAARHEQLAALLDRSLRGPLDELRAELSGLAAD
DAGQLWPEANQLLHHLAAGYGRMTTLVDNVLGYQRLAGGSDALAKAPVMLDGVVTAGIDG
AVELIGPGRAQFAVHAPPIEAEVDAPRLITALAHLVADVAGVDATGKSTVTPAPGGGYVD
STLVVAAAQRGDVVRIEVRGPSAGGDAVHQPVVRGIVAAHGGVLQTHELPGMSGSAYVLE
VPIGAGRGTVTPEPAPASVEEPVAAPALPAQQNGETTGGGRRRARRSSTDAFLESPMAPE
DGPAAEPSGRRRGRTEEAPAAAELIPAQNAGAVEPTGRRRGRPAEGAVVTAAEGAQGRPA
LGAAVPPQGVPADAAAVPATRSGRRARRAAPEAMPALPPAGPSNEPGPAALPAASGMNTG
NAASGPESADATPAAGMPVPATPAPDMPVPATPATGMPVPATPATGMPVAAAPGMPGGPA
VVTPATGVPSRGVRLTPAGPQGGPEAMALPAPAAPSAPTGPVPPGIQAAPTPVAPVAPGT
TSQGGPATPAAGVPNPPAAGMPPGLVPMGADGAPAPAGANGVPEGAAMTPVGLVPAAAQA
PAAPEAGPAPVDTTPPHGTDPARPGGRRRRALGGAAAAEGEEPRAPFALPPADADRQQDA
GDEGRHDAARDEPDEDHTPPQPHPLPTGRRRAAAAQESGTGSVPLPPALPMPAQAPTPTP
ASRAAQPLPAEAPTGETTQGRAFSVRTLGQGVPFAQQIATQQNGSGRRRKLATPPADDRP
LPLPAAEPPAPAAKAKAQPQPQTPAAPQPVPPPKPAAPGEGRSYAIGAPDQDADEGPEPL
DGPGGAVEIANQPAPLPVDDELPPEPLDNPRRLLVWPAPDVATQQALSDRGYRPVIVHSR
EEVDAQIAAFPAALFVDPLTGPITRTALQSLRQAAVAAEVPVLLAAGLGQATREAAYGAD
PAVLLKALAPRDSEQHPSRVLLIEEQDDIANALTATLERRGMQVARAAADTDAVALATQT
RPNLVVMDLMQVRRRRAGIIDWLRANGQLNRTPLVVYTSAGLDEEELPKLSSGETVLFLA
ERSTSDEVQARIVDLLAKIGTN
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcaggccatcccgaggcgctgctcgcctcgcagccatactcgacgccctcccc
gacggcctcgtgctggtcaactgcaacggcacggtcgtcaacgccaacaccatcgcgctc
ggcctcttcgagtcccccggcaccgccctcgtcggccgcggcctgctcgatctgctgccc
gagttcgactcgcggctcatccccggctccatgcgccgccccgacgccgccgacgaccgc
ggccggaccaagcccgcccggatgatcgcgcgccgcaccgacggcagcgagttccccgtc
gaggtgaccagcgcgagcctggaggacggccgcgaggcgtacgactcgcactcctcctac
accggcgacgagctgctgatgctcgtcgtccgcgatctcaccggcaccgtcgacaccgag
gccgaactggcccgctcgcagcggcagaccgagatgatcctgcgcgccgcgtccgagggc
gtcgtcggcaccgacaccgacggccgggtcgtcctcgtcaacccggccgccgcccagata
ctcggcttccgcgccggcgacctcggcggcaaggagctgcacccgctgatcctgcactcg
cggccggacggcgaaccgttcccgtacgccgagtcgccgctcgccgacacgctccggtcc
ggccgcaagcaccgggtccgcggccaggtgctgtgggcgaaggacggctcgaaggtcccc
gtcgacctcaccaccgcgcccgtccgcgacggcgaccagctcgtcggcgcggtcatgacc
ttcaccgaccggcgcccgtacgagcagatggaggaagagcgcgccgccgaactcaccgcg
cgcgaggagcggcacgccgccgagctgagcgagcgggacgagcggcacgccgccgagctc
gccgagcgcgaggagcgggcggccggggagctggccgagcggcaggagcggctggacgag
ctggagcagcggcacacggagctggccgcccggcacgaacagctcgccgccctcctcgac
cggtcgctgcgcggcccgctggacgaactgcgcgccgagctctccgggctggccgcggac
gacgccggtcagctctggcccgaggccaaccagctgctgcaccatctcgccgcgggctac
gggcggatgaccaccctcgtcgacaacgtcctcgggtaccagcggctggccggcggctcc
gacgcgctggccaaggcgccggtcatgctcgacggcgtcgtgaccgccggcatcgacggc
gcggtcgagctgatcggccccggccgggcccagttcgccgtgcacgcgcctccgatcgag
gcggaggtggacgcgccgcgtctgatcaccgcgctcgcgcatctcgtcgcggacgtcgcc
ggcgtcgacgcgaccggcaagtccaccgtcaccccggccccgggcggcggctacgtcgac
tcgaccctcgtggtcgcggcggcgcagcgcggcgacgtcgtacgcatcgaggtgcgcggc
ccgtccgccgggggcgacgccgtgcaccagcccgtcgtccgcgggatcgtggccgcccac
ggcggtgtgctgcagacccacgagctgccggggatgagcggcagcgcgtacgtgctcgag
gtgccgatcggcgccgggcgcggcacggtgacgcccgagcccgcgcccgcctccgtcgag
gagcccgtcgccgctcccgcgctgcccgcgcagcagaacggcgagaccaccggtggcgga
cggcggcgcgcccggcggtcgtccaccgacgcgttcctggagagcccgatggccccggag
gacggtcccgccgccgagccgagcgggcgtcgccgtggccgtacggaggaggcgcccgcg
gccgccgaactgatcccggcccagaacgcgggcgcggtcgagcccacgggccgtcggcgc
ggccggccggccgagggcgccgtggtgacggcggcggagggcgcccaggggcggcccgcg
ctcggcgctgccgtaccgccgcagggcgtcccggcggacgccgcggcggtccccgcgacg
cgttccggccgtcgcgcccgccgcgcggccccggaagccatgccggccctcccgcccgcc
ggcccgtcgaacgagcccggccccgccgccctgcccgcggcgagcggcatgaacaccggg
aacgccgcgagcggaccggagagtgcggacgccacgccggcggccggcatgccggttccc
gcgaccccggcgcccgacatgccggttcccgcgaccccggcgaccggcatgccggttccc
gcgaccccggcgaccggcatgccggtcgcggccgctcccgggatgccgggcggaccggcc
gtcgtgacgccggcaaccggcgtaccgagccggggcgtccggctgacgcctgcgggtccg
cagggcggccccgaggccatggccctcccggccccggccgccccgtcggcacccacgggc
ccggtgcccccgggcatccaggccgccccgacccccgttgcccccgtcgcccccggtacg
acgtcccagggcggacccgcgacgcccgccgccggcgtgccgaacccgcccgccgcgggg
atgcctcccggcctcgtgcccatgggcgccgacggcgcaccggcaccggccggcgccaac
ggcgtccccgagggcgcggccatgacccccgtcggcctcgtgcccgcggccgctcaggct
cccgcggcccccgaagccggtcccgcccccgtcgacaccaccccgccccacggcaccgac
cccgcccgccccggcggtcggcggcgccgggcgctcggcggggcggcggcggccgaaggc
gaggagccgcgggcgccgttcgcgctgccgcccgccgacgcggaccggcagcaggacgcc
ggcgacgaggggcggcacgacgccgcgcgcgacgagcccgacgaggaccacaccccgccg
cagccgcacccgctgcccaccggccgacgccgcgcggccgccgcgcaagaaagcggcacc
ggttccgtaccgctgccgcccgcgctgcccatgccggcccaggccccgactccgaccccg
gcctcccgcgccgcgcagccgctccccgcggaggcgccgaccggcgagaccacccagggg
cgggcgttcagcgtgcgcaccctcggccagggcgtgccgttcgcgcagcagatcgccacg
cagcagaacggttccggccgccgccgcaagctggcgacgccgcccgcggacgaccgtccc
ctgccgctgcccgccgccgagcccccggcccccgccgcaaaggccaaggcacagccccag
ccgcagaccccggccgccccgcagcccgtgccgccgccgaagccggccgcgcccggggag
ggccgctcgtacgccataggggcgcccgaccaggacgccgacgagggccccgagccgctc
gacggccccggcggcgcggtcgagatcgccaaccagccggccccgctgcccgtcgacgac
gagctgccgccggagccgctcgacaacccgcgccgactgctcgtctggcccgcgccggac
gtggccacccagcaggcgctgagcgaccgcggctaccggccggtgatcgtgcactcccgc
gaggaggtcgacgcacagatcgccgccttcccggccgcgctgttcgtcgacccgctgacc
ggccccatcacgcgtaccgcgctccagtcgctgcgtcaggcggccgtcgcggccgaggtc
ccggtgctgctggcggccgggctcgggcaggcgacgcgggaggccgcgtacggcgccgac
cccgccgtcctgctcaaggcgctggcgccgcgcgacagcgagcagcacccgtcgcgcgtg
ctgctcatcgaggagcaggacgacatcgcgaacgcgctgaccgcgacgctcgaacggcgc
gggatgcaggtggcgcgggccgccgcggacaccgacgcggtcgcgctggcgacgcagacc
cggccgaacctcgtggtcatggacctgatgcaggtgcgccggcggcgcgccgggatcatc
gactggctgcgcgccaacggccagttgaaccgcaccccgctggtcgtctacacctccgcc
gggctcgacgaggaggagctgccgaagctgtcctccggcgagaccgtgctcttcctggcg
gagcgctccaccagcgacgaggtccaggcccggatcgtcgacctgctggcgaagatcggc
acgaactga
DBGET
integrated database retrieval system
