Streptomyces solicamelliae: ABZO31_19845
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Entry
ABZO31_19845 CDS
T11072
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ssoc Streptomyces solicamelliae
Pathway
ssoc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ssoc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABZO31_19845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssoc03021
]
ABZO31_19845
03400 DNA repair and recombination proteins [BR:
ssoc03400
]
ABZO31_19845
Enzymes [BR:
ssoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABZO31_19845
Transcription machinery [BR:
ssoc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABZO31_19845
DNA repair and recombination proteins [BR:
ssoc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABZO31_19845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
XCW03916
LinkDB
All DBs
Position
4233015..4234037
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEYRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgtccctcgctgaccgaagaggttgtcgacgagtaccgctcgcgg
ttcgtcatcgagccgctggagccgggcttcggctacaccctcggcaacagcctccgccgt
accctcctctcctcgatcccgggcgccgctgtcacgtccatccggatcgacggcgtgctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctcatcctgaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggcccgggtctggtcaccgccgccgacatcgcgcccccggccggtgtcgaggtgcacaac
cccgacctcgtcctcgccacgctcaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgccgtgcagaacaagcaggtcggccaggagatcggc
cgcatcccggtcgactcgatctactcgccggtgctcaaggtcacctacaaggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcgcccgcgcgacgccatggcgtccgccggcaagaccctggtcgagctgttcggt
ctggcgcgcgagctcaacatcgacgccgagggcatcgacatgggcccgtcccccacggac
gccgccctggccgccgacctcgcgctgccgatcgaggagctcgagctcaccgttcgttcg
tacaactgcctcaagcgcgagggcatccactccgtgggtgagctcgtcgcccgctcggag
gcggacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggcgaag
ctggccggcatgggcctggccctgaaggacagcccgcccgggttcgacccgaccgccgcc
gccgacgcgttcggtgcggacgacgacgccgacgccggcttcgtcgagaccgagcagtac
tga
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