Streptomyces solicamelliae: ABZO31_20035
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Entry
ABZO31_20035 CDS
T11072
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ssoc Streptomyces solicamelliae
Pathway
ssoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABZO31_20035 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssoc03019
]
ABZO31_20035 (groL)
03110 Chaperones and folding catalysts [BR:
ssoc03110
]
ABZO31_20035 (groL)
03029 Mitochondrial biogenesis [BR:
ssoc03029
]
ABZO31_20035 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssoc04147
]
ABZO31_20035 (groL)
Enzymes [BR:
ssoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ABZO31_20035 (groL)
Messenger RNA biogenesis [BR:
ssoc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ABZO31_20035 (groL)
Chaperones and folding catalysts [BR:
ssoc03110
]
Heat shock proteins
HSP60 / Chaperonin
ABZO31_20035 (groL)
Mitochondrial biogenesis [BR:
ssoc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ABZO31_20035 (groL)
Exosome [BR:
ssoc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ABZO31_20035 (groL)
Exosomal proteins of other body fluids (saliva and urine)
ABZO31_20035 (groL)
Exosomal proteins of breast cancer cells
ABZO31_20035 (groL)
Exosomal proteins of colorectal cancer cells
ABZO31_20035 (groL)
Exosomal proteins of bladder cancer cells
ABZO31_20035 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
XCW03949
LinkDB
All DBs
Position
4266308..4267936
Genome browser
AA seq
542 aa
AA seq
DB search
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
IEDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLRNVAAGASPAALKKGID
AAVKAVSDELLATARPIEDKSDIAAVAALSAQDQQVGELIAEAMDKVGKDGVITVEESNT
FGLELDFTEGMAFDKGYLSPYMVTDQERMEAVLDDPYILIHQGKIASIQDLLPILEKIIQ
AGGSKPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLGDMATLTGATV
IAEEVGLKLDQAGLDVLGSARRVTVTKDDTTIVDGGGNSEDVVGRVNQIKAEIETTDSDW
DREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALV
HAVKVLEGNLDKTGDEATGVAVVRRAAVEPLRWIAENAGLEGYVITSKVAELDKGNGFNA
ATGEYGDLVKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKKEEEPADAGHGHGHGH
SH
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgaagttcgacgaggacgcccgtcgcgcccttgagcgcggcgtcaac
aagcttgccgacacggtgaaggtgacgatcggtcccaagggccgcaacgtcgtcatcgac
aagaagttcggcgcccccaccatcaccaacgacggtgtcacgatcgcccgcgaggtcgag
atcgaggacccgtacgagaacctcggcgcgcagctggtgaaggaggtggcgaccaagacc
aacgacatcgcgggtgacggcaccaccaccgccaccgtgctcgcccaggccctggtccgc
gagggtctgcgcaacgtcgccgccggtgcctccccggccgccctgaagaagggcatcgac
gccgcggtcaaggccgtctccgacgagctgctcgccaccgcccgtccgatcgaggacaag
tccgacatcgccgccgtcgccgcgctctccgcgcaggaccagcaggtcggcgagctcatc
gccgaggcgatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ttcggtctggagctggacttcaccgagggcatggccttcgacaagggctacctgtccccg
tacatggtgaccgaccaggagcgtatggaggccgtcctcgacgacccgtacatcctgatc
caccagggcaagatcgcctccatccaggacctgctcccgatcctggagaagatcatccag
gccggtggctccaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcg
accctggtcgtcaacaagatccgcggcaccttcaacgcggtggccgtcaaggcccccggc
ttcggcgaccgccgcaaggcgatgctcggcgacatggccaccctgaccggtgccaccgtc
atcgccgaggaggtcggcctcaagctcgaccaggccggtctggacgtgctgggctccgcc
cgccgggtcaccgtcaccaaggacgacaccaccatcgtcgacggcggcggcaactccgag
gacgtcgtcggccgcgtcaaccagatcaaggccgagatcgagaccacggactccgactgg
gaccgcgagaagctccaggagcgcctcgcgaagctggccggcggcgtgtgcgtgatcaag
gtcggcgccgccaccgaggtggagctgaaggagaagaagcaccgtctggaggacgccatc
tccgcgacccgcgccgcggtcgaggagggcatcgtctccggtggtggctccgcgctcgtc
cacgccgtcaaggtcctcgagggcaacctcgacaagaccggcgacgaggccacgggtgtc
gcggtcgtccgccgcgccgccgtcgagccgctgcgctggatcgccgagaacgccggcctc
gagggctacgtcatcacctcgaaggtggcggagctcgacaagggcaacggcttcaacgcc
gccaccggcgagtacggcgacctggtcaaggccggcgtcatcgacccggtgaaggtcacc
cgttccgccctggagaacgccgcctccatcgcctccctgctgctcacgaccgagaccctg
gtcgtcgagaagaaggaagaggagccggcggacgcgggccacggccacggtcacggccac
tcccactga
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