Streptomyces solicamelliae: ABZO31_24800
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Entry
ABZO31_24800 CDS
T11072
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ssoc Streptomyces solicamelliae
Pathway
ssoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABZO31_24800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssoc03019
]
ABZO31_24800
03016 Transfer RNA biogenesis [BR:
ssoc03016
]
ABZO31_24800
Enzymes [BR:
ssoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ABZO31_24800
Messenger RNA biogenesis [BR:
ssoc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ABZO31_24800
Transfer RNA biogenesis [BR:
ssoc03016
]
Prokaryotic type
tRNA degradation factors
ABZO31_24800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_PNO1_2nd
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
XCW04830
LinkDB
All DBs
Position
5306884..5309103
Genome browser
AA seq
739 aa
AA seq
DB search
MENETHYAEAVIDNGTFGTRTIRFETGRLARQAAGSAVAYLDDDTMVLSATTASKKPKDQ
LDFFPLTVDVEERMYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQI
VATVMALNPDHLYDVIAINAASASTQLAGLPFSGPIGGVRVALINGQWVAFPTHTELEDA
VFDMVVAGRVLEDGDVAIMMVEAEATEQTIQLVKGGAEAPTEEVVAAGLEAAKPFIKVLC
KAQTDLAAKAAKPEGEFPVFLDYQDDVFAALSDAVRGELSQALTIAGKQEREAELDRVKE
LAAEKLLPAFEGREKEISAAYRSLTKALVRERVIKDKVRIDGRGITDIRTLAAEVEAIPR
VHGSALFERGETQILGITTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSVGETGRVGSP
KRREIGHGALAERAIVPVLPTREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAPVAGIAMGLISQEIDGQTHYVALTDILGAEDAFGDMDFKVAGTKEFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMMEAIDTPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGAEITIEDDGTIYIGAADGPAAEAARATINGIANPTMPEVGERYLGTVVK
TTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVLPVGSKVQVEIAEIDQRGKLSL
IPVIADEDAAEGDKDDTDK
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaggccgtgatcgacaacggcaccttcggcacccgc
accatccgcttcgagacgggccgcctggcccgtcaggccgccggttccgccgtggcctac
ctggacgacgacaccatggtgctgtcggccaccaccgcttcgaagaagcccaaggaccag
ctcgacttcttccccctgacggtcgacgtcgaggagcggatgtacgcggccggcaagatc
cccggctccttcttccgccgtgagggccggccctccgaggacgcgatcctcacctgccgc
ctgatcgaccgcccgctgcgcccgtccttcaagaagggcctgcgcaacgagatccagatc
gtcgcgacggtcatggcgctcaaccccgaccacctgtacgacgtgatcgcgatcaacgcc
gcgtccgcgtccacccagctggccggtctgcccttctccggcccgatcggcggcgtccgc
gtcgcgctgatcaacggccagtgggtcgcgttcccgacccacaccgagctcgaggacgcc
gtcttcgacatggtcgtcgccggccgtgtcctggaggacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagcagacgatccagctggtcaagggcggcgccgaggcgccg
accgaggaggtcgtcgccgccggtctcgaggccgcgaagcccttcatcaaggtcctgtgc
aaggcgcagaccgacctcgccgccaaggccgccaagcccgagggcgagttcccggtcttc
ctggactaccaggacgacgtcttcgccgccctctccgacgccgtccgcggcgagctgtcc
caggcgctgaccatcgcgggcaagcaggagcgcgaggccgagctggaccgcgtcaaggag
ctcgccgccgagaagctgctcccggccttcgagggccgcgagaaggagatctccgccgcg
taccgctccctgaccaaggccctggtgcgcgagcgcgtcatcaaggacaaggtccgcatc
gacggccgcgggatcacggacatccgtaccctcgccgccgaggtcgaggcgatcccgcgg
gtccacggttccgcgctgttcgagcgtggcgagacccagatcctgggcatcaccaccctc
aacatgctccgcatggagcagcagctggacaccctctccccggtgacccgcaagcgctac
atgcacaactacaacttcccgccgtactccgtcggtgagaccggccgcgtgggctcgccc
aagcgccgcgagatcggccacggtgcgctcgccgagcgcgccatcgtgccggtgctgccg
acccgcgaggagttcccgtacgcgatccgccaggtgtccgaggccctcggctccaacggc
tcgacgtccatgggctccgtctgcgcctccaccatgtcgctgctgaacgccggtgtgccg
ctgaaggccccggtcgccggtatcgccatgggtctgatctcccaggagatcgacggccag
acgcactacgtcgccctcaccgacatcctcggtgcggaggacgccttcggcgacatggac
ttcaaggtcgccggtacgaaggagttcgtcaccgccctccagctcgacaccaagctggac
ggcatcccggcctccgtcctggccgcggccctcaagcaggcccgcgacgcccgcctccac
atcctcgacgtgatgatggaagcgatcgacaccccggacgagatgtcccccaacgccccg
cggatcatcaccgtgaagatccccgtggacaagatcggcgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacaccggcgccgagatcacgatcgaggacgacggc
accatctacatcggtgccgccgacggcccggccgccgaggccgcccgcgccacgatcaac
ggcatcgccaacccgaccatgccggaggtcggcgagcgctacctgggcacggtcgtcaag
accaccaccttcggtgcgttcgtctccctgctcccgggcaaggacggcctgctgcacatc
tcgcagatccgcaagctcgccggtggcaagcgcgtggagaacgtcgaggacgtgctgccg
gtcggctccaaggtccaggtcgagatcgccgagatcgaccagcgcggcaagctctccctg
atccccgtgatcgcggacgaggacgccgctgaaggcgacaaggacgacaccgacaagtga
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