Streptomyces solicamelliae: ABZO31_25205
Help
Entry
ABZO31_25205 CDS
T11072
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ssoc Streptomyces solicamelliae
Pathway
ssoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABZO31_25205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssoc03019
]
ABZO31_25205
03400 DNA repair and recombination proteins [BR:
ssoc03400
]
ABZO31_25205
Enzymes [BR:
ssoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABZO31_25205
Messenger RNA biogenesis [BR:
ssoc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABZO31_25205
DNA repair and recombination proteins [BR:
ssoc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ABZO31_25205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
Pribosyltran
AAA_22
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
XCW04899
LinkDB
All DBs
Position
complement(5410225..5412408)
Genome browser
AA seq
727 aa
AA seq
DB search
MTHAARPEDRASLRAAADSVLARLVGDATGTARLREDQWRAIEALVADRRRALVVQRTGW
GKSAVYFVATSLLRERGSGPTVIVSPLLALMRNQVDAAARAGIHARTINSSNTEEWETIQ
AEVAAGSVDVLLVSPERLNNPDFRDQVLPALAAATGMLVVDEAHCISDWGHDFRPDYRRL
RTMLADLPVGVPVLATTATANARVTADVAEQLGTGAGTDALVLRGPLDRESLSLGVLRLP
DAAHRLAWLADHLNELPGSGIIYTLTVAAAEEVTAYLRQCGHTVSSYTGRTENADRQQAE
EDLLANRVKALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVEHAEVLLL
PGPEDEAIWKYFASVAFPPEEQVRRTLDVLAAADRPLSLPALEPLVELRRTRLETMLKVL
DVDGAVHRVKGGWTSTGRPWVYDRERYAWVARQREAEQEAMRAYAATSTCRMEFLRRQLD
DEEAAPCGRCDNCAGARFEAKVSEAALDAAKGELGRPGVEVEPRRMWPTGLPAVGVDLKG
RIPADELAFAGRALGRLSDIGWGNRLRPMLAERAPDGPVPDDVVQAVVRVLADWAKGPGG
WASGAADAPARPVGVVTVASRSRPQLVDSLGRRISEIGRMPLLGQVAYAPEAEDVRLSRT
NSAQRLVGLHRALTVPPALAEQLKAAGGPVLLVDDLSDSGWTLAVAARLLRRSGAEGVFP
LVLAVQG
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgacccacgcagctcgccccgaagaccgcgcgtcgctccgcgccgccgccgactccgtc
ctcgcccgcctcgtcggtgacgccaccggcacggcgcggctgcgcgaggaccagtggcgg
gcgatcgaggcgctggtcgccgacagacgccgggcgctcgtcgtgcagcggacgggctgg
ggcaagtcggcggtgtacttcgtggcgacgtcgctgctgcgcgagcggggcagcggcccg
accgtgatcgtctccccgctgctcgcgctgatgcgcaaccaggtcgatgccgccgcgcgc
gccgggatccacgcgcgcacgatcaactcctcgaacaccgaggagtgggagacgatccag
gcggaggtggcggccggctcggtggacgtgctcctcgtcagccccgagcggctcaacaac
cccgatttccgcgaccaggtgctgcccgcgctggcggccgccaccggcatgctggtggtc
gacgaggcgcactgcatctcggactggggacacgacttccggcccgactaccgacggctg
cgcaccatgctggccgacctgcccgtgggcgtcccggtgctcgccaccacggcgaccgcc
aacgcccgcgtgacggcggacgtcgccgagcagctcggcaccggcgcgggcacggacgcc
ctggtgctgcgcggaccgctggaccgggagagcctcagcctcggggtgctgcgcctgccg
gacgcggcgcaccggctggcctggctcgcggaccatctgaacgaactcccgggctccggg
atcatctacacgctcacggtcgccgcggcggaggaggtcaccgcatacctgcgccagtgc
ggtcacaccgtgtcctcgtacacgggccgcacggagaacgccgaccgccagcaggccgag
gaggacctgctggccaaccgggtcaaggccctggtcgccacctcggcgctgggcatgggc
ttcgacaagcccgacctcgggttcgtcgtgcacctcggttcgccttcctcgccgatcgcc
tactaccagcaggtgggccgggccggccgcggtgtggagcacgcggaggtgctgctgctg
cccggaccggaggacgaggcgatctggaagtacttcgcctcggtggcgttcccgccggag
gaacaggtccgccgcaccctcgacgtcctggccgctgccgaccgtccgctgtcgctgccc
gcgctcgagccgctggtcgagctgcgccggacacgcctcgagacgatgctcaaggtgctg
gacgtggacggcgcggtgcaccgggtgaagggcggctggacgagcaccggccggccgtgg
gtgtacgaccgcgagcggtacgcgtgggtggctcggcagcgggaggccgagcaggaggcg
atgcgggcgtacgcggccacctcgacgtgccggatggagttcctgcggcggcagttggac
gacgaggaggccgcgccgtgcggccgctgcgacaactgcgcgggggcgcgcttcgaggcg
aaggtgtcggaggcggcgctcgacgcggcgaagggcgagctcggccgtcccggtgtcgag
gtggagccgcggcggatgtggccgaccggactccccgccgtgggcgtcgatctgaagggg
cgtattccggccgatgagctggcgttcgccgggcgggccctcggccgcctctcggacatc
ggctgggggaaccggctgcggccgatgctcgcggagcgggcgccggacgggccggtgccg
gacgacgtggtgcaggcggtggtgcgggtgctggccgactgggcgaaggggcccggtggt
tgggcctccggggcggcggacgctccggcgcggccggtcggggtggtgacggtcgcctcg
cgcagccgtccgcagctggtggactcgctgggccgacggatctccgagatcggacggatg
cccctgctgggacaggtcgcgtacgcccccgaggcggaggacgtgcggctgtcccgtacc
aacagcgcccagcggctggtcggtctccaccgggcgctgacggtccctccggcgctcgcg
gaacaactgaaggcggccggcgggccggtgcttctggtggacgacctttcggacagcggc
tggacgctcgcggtcgccgcgcggctgctgcgccgctccggagcggagggggtgtttccg
ctcgtactggccgtccagggctga
DBGET
integrated database retrieval system
