Streptomyces solicamelliae: ABZO31_30960
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Entry
ABZO31_30960 CDS
T11072
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ssoc Streptomyces solicamelliae
Pathway
ssoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABZO31_30960 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssoc03019
]
ABZO31_30960 (recQ)
03400 DNA repair and recombination proteins [BR:
ssoc03400
]
ABZO31_30960 (recQ)
Enzymes [BR:
ssoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABZO31_30960 (recQ)
Messenger RNA biogenesis [BR:
ssoc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABZO31_30960 (recQ)
DNA repair and recombination proteins [BR:
ssoc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ABZO31_30960 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Helicase_Sgs1
ResIII
Motif
Other DBs
NCBI-ProteinID:
XCW05964
LinkDB
All DBs
Position
6711744..6713714
Genome browser
AA seq
656 aa
AA seq
DB search
MALTDASPEISDALNVLHRVFGYDSFRGEQQQIIEQVVSGGDALVLMPTGGGKSLCYQIP
ALVRQGTGVVVSPLIALMQDQVDALNALGVRAGFLNSTQDPYERQAVEQAFLADELDLLY
LAPERLRTEGTQRLLDRGTVSLFAIDEAHCVAQWGHDFRPDYLALSMLHERWPKVPRIAL
TATATEATHAEIAQRLGLQEAKHFVASFDRPNIQYRIVPKNSAQKQLLELIRTEHEGDAG
VVYCLSRASVEKTAAFLVEQGVDAVPYHAGMDARERAANQARFLREDGVVVVATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGEPATAWLAYGLQDVVQQRKLIDSSEGDE
AHRRGLAAHLDAMLALCETVDCRRVRLLEYFGQSSKPCGNCDTCLTPAESWDGTVAAQKL
LSTVWRLAHERRQKFGAGQVIDILQGKKTAKVIQFDHDTLSVFGVGADIGTAEWRGVIRQ
LLAQRLLAVEGDYGTLVLTDASGEVLGGRRTVPMRKEKAPVPASRKAAGSRSGGKGARVP
VDLPEAAVPVFEALRAWRAATAREQGVPAYVVFHDATLREIATVLPATVTELGTVGGVGE
AKLTKYGQGVLDTLAETRGEAPPEPPAAAKQPVPPQDDDEPPFDPDEIDPPWDDWE
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggccctcaccgacgcctcgcccgagatctccgacgccctgaacgtgctgcaccgcgtc
ttcggctacgactccttccgcggcgagcagcagcagatcatcgagcaggtcgtctccggc
ggcgacgccctcgtgctgatgccgaccggcggcggcaagtcgctctgctaccagatcccg
gcgctggtcagacagggcacgggcgtggtcgtctcgccgctgatcgcgctcatgcaggac
caggtggacgcgctcaacgccctcggcgtgcgggccgggttcctgaactcgacccaggac
ccgtacgagcggcaggccgtcgagcaggccttcctcgcggacgagctggacctgctgtac
ctggccccggagcggctgcgcacggaggggacgcagcggctgctggaccggggcacggtg
tcgctcttcgcgatcgacgaggcccactgtgtcgcccagtggggccacgacttccggccc
gactacctggccctgtcgatgctccacgagcgctggcccaaggtgccgcggatcgcgctc
accgcgacggccaccgaggccacccacgcggagatcgcccagcggctcggcctgcaggag
gcgaagcacttcgtcgccagcttcgaccggcccaacatccagtaccgcatcgtccccaag
aacagcgcgcagaagcagttgctcgaactgatcaggaccgagcacgagggcgacgccgga
gtcgtctactgcctctcccgggcctcggtcgagaagaccgccgccttcctggtcgagcag
ggcgtcgacgccgtcccgtaccacgcgggcatggacgcccgggagcgcgccgccaaccag
gcccgcttcctgcgcgaggacggtgtcgtggtcgtcgcgaccatcgccttcggcatgggc
atcgacaagccggacgtgcgcttcgtcgcccatctcgacctgccgaagtccgtcgagggc
tactaccaggagaccggccgtgcggggcgtgacggcgagccggcaacggcctggctcgcg
tacggcctgcaggacgtggtccagcagcgcaagctgatcgactcctccgaaggcgacgag
gcccaccggcgcggcctcgccgcccacctcgacgcgatgctcgcgctctgcgagaccgtc
gactgccggcgggtccgcctcctggagtacttcggccagtcctcgaagccgtgcggcaac
tgcgacacctgcctgacgccggccgagtcctgggacggcacggtcgccgcgcagaagctg
ctgtccacggtgtggcggctcgcccacgagcggcgccagaagttcggcgcggggcaggtc
atcgacatcctgcagggcaagaagaccgccaaggtcatccagttcgaccacgacaccctg
tcggtgttcggcgtcggcgccgacatcggcacggcggagtggcgcggcgtgatccgccag
ctcctggcgcagcggctgctggccgtggagggcgactacggcacgctggtcctcaccgac
gccagcggggaggtgctcggcggccgccgcaccgtcccgatgcgcaaggagaaggccccc
gtgcccgcctcccgcaaggccgcgggctcccgctccggcgggaagggggcgagggtgccg
gtggacctgccggaggccgcggtgccggtcttcgaggcgctgcgcgcctggcgcgcggcg
accgcccgcgagcagggcgtcccggcgtacgtggtcttccacgacgccaccctgcgcgag
atcgcgaccgtcctgccggccaccgtcacggagctcggcaccgtcggcggtgtcggcgag
gccaagctgaccaagtacggccagggcgtcctcgacaccctggcggagacccgcggcgag
gcaccgcccgagcctccggcagcggcgaagcagcccgtaccgccgcaggacgacgacgaa
ccgccgttcgacccggacgagatcgacccgccctgggacgactgggagtga
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