Solea solea (common sole): 131443278
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Entry
131443278 CDS
T10853
Symbol
ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
ssoe Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssoe03041
]
131443278 (ddx1)
03016 Transfer RNA biogenesis [BR:
ssoe03016
]
131443278 (ddx1)
Enzymes [BR:
ssoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131443278 (ddx1)
Spliceosome [BR:
ssoe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
131443278 (ddx1)
Transfer RNA biogenesis [BR:
ssoe03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
131443278 (ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
131443278
NCBI-ProteinID:
XP_058468733
LinkDB
All DBs
Position
17:complement(9389757..9396222)
Genome browser
AA seq
739 aa
AA seq
DB search
MAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI
QIVYETLKDQQEGKKGRASIKTGGAIFNNWQMNPYDRSTAFAIGGDGLCCQSREFKEWHG
CRSTKGVTKGKYYYEVTCHDQGLCRIGWSTSQAALDLGTDKYGFGFGGTGKKSNNKQFDS
YGEEFTMHDTIGCYLDLDKSQISFSKNGNDLGVAFEIPQNLKNQAFFASCVLKNAELKFN
FGGEAFKNPPKSGFVALDQAPEAHAVKSSQTGSAKVSQVKVSSNAPKALILEPSKELAEQ
TLNNVKHFKKYVDNPKLRELLVIGGVAAKEQLSVLEQGVDIVVGTPGRLDDLISTGKLSL
SQIRFLVLDECDGLLSAGYTDFINRIHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSER
IMHFPTWVDLKGEDSVPETVHHVVVPVNPKVDRLWERLGKNHVRTDEVHAKDNTRPGANS
AEMWSEAIKMLKGEYTVRAIKEHKMDQAIVFCRTKIDCDNMEQYFIQQGGGPDSKSHQLS
CVCLHGDRKPNERKNNLERFKRKEVRLLICTDVAARGIDIHGVPHVINVTLPDEKQNYVH
RIGRVGRAERMGLAISLVAMEKEKVWYHVCANRGRGCYNTRLKEDGGCTIWYNEKELLSD
IEEHLKCTITQCEPDLKIPVDEFDGKVTYGQRRATGGGNYKGHVDALAPTVQELAGLESE
AQTSFLHLGYLPNQLFRAF
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggcgttttctgagatgggagttatgcctgagatcgcgcaggctgtcgaagagatggac
tggctgctacctactgacatacaagcagagtctattccccttattcttggtggaggagac
gtactcatggcagcagaaactgggagtggtaaaacaggagccttcagtatccctgtgatc
cagattgtatatgagaccctgaaggatcagcaggaaggcaagaagggcagagcctccatc
aagactgggggagcaattttcaacaactggcagatgaatccatatgaccgcagcacagcc
tttgctattggtggagatggactgtgctgccagagcagggagtttaaagagtggcatggc
tgtcgctctacaaaaggtgtcaccaaaggaaagtactattatgaggtgacctgccatgat
cagggtctgtgtagaataggctggtccaccagtcaggcagcgttggacttgggaactgat
aaatatggttttgggtttggagggactggaaagaaatcaaacaacaagcagtttgacagc
tatggagaggagtttactatgcatgatacaattggatgctacctggatttagacaaaagc
caaatttccttctccaaaaatggcaacgacctcggcgtggcttttgaaatcccacagaat
ctgaagaatcaggccttctttgcctcctgtgtgctcaagaatgcagagctgaagttcaac
tttggaggggaggcctttaaaaacccccccaaaagtgggtttgttgccctggatcaggca
ccagaggctcacgctgtcaaatcctctcagacaggcagtgctaaagtcagtcaggtgaaa
gtatcatccaatgctcccaaagctctgatcctcgagccgtcaaaagaattagctgagcaa
accctgaacaacgttaaacactttaagaaatatgtggacaaccccaaactcagggaactg
ctggtgattggtggtgtggctgcaaaggagcagctgtctgtcttggaacaaggggttgac
attgtggtgggaacacctggcagactggatgacctcatatccactgggaaactcagtctg
tcccaaattcgctttctggtcctggatgagtgtgatggcctcctctcagcaggctatacg
gattttatcaacagaatccataaccaaatcccacaggtgacgtctgacggcaagaggctg
caggtgatcgtttgttcggccactctccactcctttgacgtgaagaagttgtccgagcgc
atcatgcattttcccacatgggtggacttgaagggtgaggactctgtccccgagactgtc
catcatgtggtggtgcctgtgaaccctaaagtcgatcgtctctgggagcgtctgggtaaa
aaccacgtccgcactgatgaagtccatgccaaagataacaccagaccgggagccaattct
gcagaaatgtggtcagaagcgattaagatgctgaagggcgagtacacagtgagggccatc
aaagagcacaaaatggaccaggccatagtcttctgtcgcaccaagatcgactgtgacaac
atggaacagtacttcatccagcaaggaggaggtccagatagtaaaagccaccagttgtct
tgtgtttgtctccatggcgatcgcaaacccaatgagcgtaaaaataacttggagcgtttc
aagagaaaagaggtgaggctcctgatctgcacagatgtagctgcgagaggaattgacatc
cacggagttcctcacgtgattaacgtaactctgccagatgagaagcagaactacgtccat
cgcatcggcagagtcggacgagccgagagaatgggactggctatttccttagttgctatg
gaaaaagagaaggtgtggtaccatgtttgcgctaaccgaggcaggggttgctataacacc
cgcctgaaggaggacggaggttgcaccatctggtacaatgagaaagagctcctgtcagat
atcgaggagcatctgaagtgcaccatcacccagtgcgagccagaccttaaaatacctgtg
gatgagttcgatggaaaggtcacttatggtcagcgcagggcaacgggaggtggtaactac
aagggtcacgtggacgcattggctccgacggtccaggagctcgctggcctcgagagtgaa
gcccaaacttccttcctccacctcggatacctgccaaaccagctcttcagagccttctaa
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