Solea solea (common sole): 131443327
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Entry
131443327 CDS
T10853
Symbol
arid1b
Name
(RefSeq) AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131443327 (arid1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssoe03000
]
131443327 (arid1b)
03021 Transcription machinery [BR:
ssoe03021
]
131443327 (arid1b)
03036 Chromosome and associated proteins [BR:
ssoe03036
]
131443327 (arid1b)
Transcription factors [BR:
ssoe03000
]
Eukaryotic type
Helix-turn-helix
ARID
131443327 (arid1b)
Transcription machinery [BR:
ssoe03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
131443327 (arid1b)
Chromosome and associated proteins [BR:
ssoe03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
131443327 (arid1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
DUF4937
Motif
Other DBs
NCBI-GeneID:
131443327
NCBI-ProteinID:
XP_058468834
LinkDB
All DBs
Position
17:complement(24132702..24150712)
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AA seq
1970 aa
AA seq
DB search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NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcagaaaacaacatcctccaggtggagaagagcggagcagacgagcatcatg
aggaggaacatcagccgaggaggaggacagcaggaaaggctgcagcaggagcggaaaaag
ccgcggctcctccgggttgactctgatgatgatggggctggaggaggaggaggagggcct
tgctctgatcaacatggcggacaacaaagcgcagggactggggtgagacgagcggaacac
agcgccatggaccagcttcacaactcccacgaaggctataacaacaacaacaacagcccg
tacaaccactacccgaactaccgacccggatacgggaccagtggttacggaggcatgatg
agtccctcccgccaggggaacagcctgctgggcccgagctcaaaccacagcaaagcggct
atgactgctgccagctccccggctggaggtggaggcggcagcggcggaggatttcagcga
tacaccgggcagcagcagccgccgcagccacccggagctacaccgactctgaaccagtta
ttaacgtctccgagtccgatgatgcgcggttatggaggcggatattcagactttaatcac
ccctcctccgctcagcagcagcagccgagcatggggccggctaaagatacaggctcccag
tacggctcggctgctcacggctgggggggacaacaaataacccacccggcgttgagcccg
gggaacaccgggcagggcggcggcaggtcccaggtgccgcccatggacccgatgtcgatg
aagcgctctcagctctacagtatgagcaacaacccatacccgcaacagcaacaacagggg
gcgccgtatcctggccagtcctatggctccccctccccccacagatacccgatgggaatg
cccagcagggggcaaatcgggatgggaccgatgcagtaccctcagcaacagatgagctct
cagtactcgcagcagcaacagcagcagcagggttactgtcagccgggtcagcctccgtac
ttcagcccgcctcagcagcagcagcccgccgcccccagccagccgccatacatgcagccc
cgcccactgcctcagcaggaggcaccacaggaggcgtacgccggccgtggtcagtctgct
gctatgactcctgggaaaccaaaccatgaggagatgagtcaacaggagaggccatccagc
ctccctgatctttccgggtccattgacgacttgcccacaggtactgaggctgcggtgagt
tcaggggcgtcgggatctgggagtattcagggcgatcagggaactccagctcgctctcct
ttctcgccccacgtgtcgccccgacaccctccgcccgctcactccgggccctcgccgtcc
ccctcgctgtcccccgcaggctccagcagccaatcacgatcaggacctttgtccccggcc
accagtggaccaggagctcagctgacccctcaggtcccgggtcctggatcagatgttggt
cctcattcgtcccagatgaccatgactcaggacagaggtttgtcttcttccatgcagcgt
agtgccgcagggcctcagtttggcccccagcagtctgcaccgcccatgtcccctcacccg
ccactggggggtgcagtgcaccacggctcctaccaacagggcagctcatacggccagtat
ggccccccaggtaactacccctgcccccccaactacagcggccccagcccgggcctggcc
aacagcctggggctgaacgccggcagtccgatgcacggtcaaggtccgtccactccagca
ggtcgcggtcccgggcctggagctggggggcggtcctaccccgccgcggggagtgccatg
gcccccacctccccaggtatgccacagcccgctggtcagggcatgaggcctccggggccc
aacaccggccgcaaaccactcgatgtcggcccgagcaccgggcccggtgccaactcctca
ccctcgttctcagccggagctcagaacaggcctcccttcacccgctcgcccggctaccac
aacaagtcttggccagggagtggagtctccctctctccacaccactcccccctccctcac
ccctcccatcactcccagcagggaaccagtgctgtgcaggcagagcatcatggacagggc
agcagcttcccgaccatgacagcaatggcagggatgggccccggggccgccggagtcccc
acaggtccctacagccagcagcagccgggcagtaactctggaaggatgacaccgcagggg
cccgtcctcagccagcagggggccccctactacgccccgccctcaggctccatgatgatg
tcagcagatgtgatggctgctcatccagacaccaagcagagggcggagctcagcaaagag
ggtgtggcctcttccacagaaccacccaaacctaagaagcccagtgtggccaccatgacc
agcgagaagatcacacggctgtacgagatgggctctgagcctgagaggaggccgtgggtc
gaccgctacctgtccttcatggaggagcgagggacggccgtcccacacctgcccgccgtc
ggcaagaagccgctggacctgtgtagactctacctgtccgtcagagacatcgggggactg
gccatggtgaataagaataagaaatggagggagctgtcgtcactgctgagtgtggggacg
tccagcagctcggccagttccctgaagaagcagtacatccactacctgttcgcctacgag
tgtcaggtggagcgtggggaggagcctccacccgaggggccggcccccagcggggacgcc
aagaaaccaacgtcactgcaggccaagatccagcccccgtccccagccaactccagctcc
ctgcaggggcccagcactcctcagtccagcagcagctccctgaccgaggcccccacggac
ctgaagcccccgacccccgcctccacaccacacggccagataggcccccagcccggaaac
aggaccatggtgagtgtccaggacccgttctctgaaggcagcgatccggctttccacaat
aagagaggggcgggtcctggaggggccccctaccagcagggaggaggtccagcagagtcc
ccgatgaggatgcagtacgatgccaacaaagacccatacggaggagtgaggaaaggtcct
ggacctggtgaggccttcggtcccagtcagatgcccggcgggtccatgcaggaaatgtat
cctcgcgggatcggacccagaccccagtactcgtacagtcccgggttcgagcgcagactg
gaccacgtgatgggaccagagggaggcgcggcgccccctgtgggtcagagtgggaacgag
gctggcatgttcccgtccagcaggttcccgcagcagagacacgacacctacgcgcagcag
ttccctcacaacatggcctacacttcccatcagcccctgtttcctcagcagcagggctac
aagcgaccgacggacggaatgttcccgccctctaagcgtcatgagggggaggggtttggc
gcacagcagtttggcgctcagcagcccgaaatgttcggcccgtcgtacggaggaggggga
ggagccgggggaggagcttacctgggttctgagcgacggccggtccagggtcagtatccg
tatccgtacggccgcgagcgcccgccgccgcagcacgtcctgctgggctcaggaccccca
gtgtccgggggccacggggaggggccccaggcaaacatatggccccccaggacagacctg
agctacacctacaacaggggtctgaaccgaggggaggagccagagggcagggcccccccg
gagagccagtggccccccggtcacctgggccagcgccagcccccctacccccccccacac
tcctcctcctcatcatcatcatcatcaccgtccatgccctccagaccacctctctcctct
ttccaagccacacccgctgtccctaaccacctgacccgctctcacagcccctccaccttc
ccccggcccatgggcggttctctgtccccgaacagtgccccatacctgccctctgtgaag
aaaccggcacttcctgctgtcggccccccgcccacccacagcctgccctccctcatcagc
agagactttagcttcccgcctggctctgtggaggccacgccccccagagtaaagccacgg
cgccgactcaccgccaaggacacaggaacgccggaggcgtggcgagtgatgatgtcactg
aagtccggcctcttagcagagagcacgtgggccctggacacgatcaacatcctgctgtac
gacgacaatagtgcaggctcattcatcctctcacagcttcctggtttccttgaactcgtc
gtggagtttttccgtcgatgcctgatccagatcttcggtctcctggaggagtacgaggtg
ggaggagccgagggccagggggcgctgttggtgcctcagccccacccccctcaacagcag
gaggcggggctgaaagagacaaatgaccaatcagcacaggagtgggtgaggagttcagag
gaggcgtcgccacttcacacgatgtctatgaccactgaggaggcggagtgtgcggagctc
cgccctccacaggccagcaagtatgacaaactaccaatcaaagtggaggagaaggaggag
gcgtggcaggaggtggaggagcgctgggcggagcttagcagacccaatggcttcatcagt
ggcctcctgcactggagagcagggggcggagactccactgcccacatccagactcacttt
gagccgcgcacactagactccgcccccccagaccctgcacagaggagagaggagagggag
caaggagacgaggacagggaggaagaggccggaggtcaaaggtcactcagtcagctggag
gatgagccgcgctgctgggacgcggcgccgctgtccacggccgagtcgtggcaggactcg
ctgtcgcggcgctgcgtgtgcgtctccaacgtgctgcgtggcctctccttcgtccctggc
aacgacggcgccatgtcgcgacacccgggcctggtgctgatcctgggccgcctggtgctg
ctgcaccaccgccacccacaccgcagacgcacgccgccctcctaccagcgggaggcggag
cgcggcctggcgtgcagccgcgacgagtggtggtgggagtgtctggcggcgctgcgggag
aacgcgctggtgacgctcgccaacatgtcgggtcggctggacctgtcgctgtacccggag
agcgtgtgtctgccgctgctggacgggctgctgcactggctggtctgtccggccgccgag
gcgcaggacccgtttgcagcggcggggggcggtccctcatcgtcactgacgccacagcgg
ctggtgctggagtgtctgtgcaagctgagcatccaggacgctaacgtggacctgctgctc
gccacgccgccattcagccggcagctcgaggtcttcggtacgctgctgcgactcatcggt
gagaggcggagtcaggtgtgtcgggagatggctgtggccgtcctcgctcacctggtgcag
ggtgacgcggcggcggcgcgggccgtggcccggctgaagggcagcgtgggaactctgatc
ggtttcctggaggacagtgttgccgtggcgcagtaccaccagagtccacacggcgcgctg
cacgccgcctccgtgccgccgccggagccacccagcgtcaacatgatgtgccgcgctgcc
aaggccctgctcgccatggcgacggtggaggagaaccgggcggagtttgtggtgcacgag
agtcgactgctggacgtgtcgctgtcggcggcgctgagctcgtctgtggcgtccgtcatg
tttgaggtgctgttcaaactcagccgctcgtga
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