KEGG   Solea solea (common sole): 131443327
Entry
131443327         CDS       T10853                                 
Symbol
arid1b
Name
(RefSeq) AT-rich interactive domain-containing protein 1B
  KO
K11653  AT-rich interactive domain-containing protein 1
Organism
ssoe  Solea solea (common sole)
Pathway
ssoe03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:ssoe00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    131443327 (arid1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ssoe03000]
    131443327 (arid1b)
   03021 Transcription machinery [BR:ssoe03021]
    131443327 (arid1b)
   03036 Chromosome and associated proteins [BR:ssoe03036]
    131443327 (arid1b)
Transcription factors [BR:ssoe03000]
 Eukaryotic type
  Helix-turn-helix
   ARID
    131443327 (arid1b)
Transcription machinery [BR:ssoe03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     131443327 (arid1b)
Chromosome and associated proteins [BR:ssoe03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    131443327 (arid1b)
SSDB
Motif
Pfam: BAF250_C ARID DUF4937
Other DBs
NCBI-GeneID: 131443327
NCBI-ProteinID: XP_058468834
LinkDB
Position
17:complement(24132702..24150712)
AA seq 1970 aa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NT seq 5913 nt   +upstreamnt  +downstreamnt
atggaagagcagaaaacaacatcctccaggtggagaagagcggagcagacgagcatcatg
aggaggaacatcagccgaggaggaggacagcaggaaaggctgcagcaggagcggaaaaag
ccgcggctcctccgggttgactctgatgatgatggggctggaggaggaggaggagggcct
tgctctgatcaacatggcggacaacaaagcgcagggactggggtgagacgagcggaacac
agcgccatggaccagcttcacaactcccacgaaggctataacaacaacaacaacagcccg
tacaaccactacccgaactaccgacccggatacgggaccagtggttacggaggcatgatg
agtccctcccgccaggggaacagcctgctgggcccgagctcaaaccacagcaaagcggct
atgactgctgccagctccccggctggaggtggaggcggcagcggcggaggatttcagcga
tacaccgggcagcagcagccgccgcagccacccggagctacaccgactctgaaccagtta
ttaacgtctccgagtccgatgatgcgcggttatggaggcggatattcagactttaatcac
ccctcctccgctcagcagcagcagccgagcatggggccggctaaagatacaggctcccag
tacggctcggctgctcacggctgggggggacaacaaataacccacccggcgttgagcccg
gggaacaccgggcagggcggcggcaggtcccaggtgccgcccatggacccgatgtcgatg
aagcgctctcagctctacagtatgagcaacaacccatacccgcaacagcaacaacagggg
gcgccgtatcctggccagtcctatggctccccctccccccacagatacccgatgggaatg
cccagcagggggcaaatcgggatgggaccgatgcagtaccctcagcaacagatgagctct
cagtactcgcagcagcaacagcagcagcagggttactgtcagccgggtcagcctccgtac
ttcagcccgcctcagcagcagcagcccgccgcccccagccagccgccatacatgcagccc
cgcccactgcctcagcaggaggcaccacaggaggcgtacgccggccgtggtcagtctgct
gctatgactcctgggaaaccaaaccatgaggagatgagtcaacaggagaggccatccagc
ctccctgatctttccgggtccattgacgacttgcccacaggtactgaggctgcggtgagt
tcaggggcgtcgggatctgggagtattcagggcgatcagggaactccagctcgctctcct
ttctcgccccacgtgtcgccccgacaccctccgcccgctcactccgggccctcgccgtcc
ccctcgctgtcccccgcaggctccagcagccaatcacgatcaggacctttgtccccggcc
accagtggaccaggagctcagctgacccctcaggtcccgggtcctggatcagatgttggt
cctcattcgtcccagatgaccatgactcaggacagaggtttgtcttcttccatgcagcgt
agtgccgcagggcctcagtttggcccccagcagtctgcaccgcccatgtcccctcacccg
ccactggggggtgcagtgcaccacggctcctaccaacagggcagctcatacggccagtat
ggccccccaggtaactacccctgcccccccaactacagcggccccagcccgggcctggcc
aacagcctggggctgaacgccggcagtccgatgcacggtcaaggtccgtccactccagca
ggtcgcggtcccgggcctggagctggggggcggtcctaccccgccgcggggagtgccatg
gcccccacctccccaggtatgccacagcccgctggtcagggcatgaggcctccggggccc
aacaccggccgcaaaccactcgatgtcggcccgagcaccgggcccggtgccaactcctca
ccctcgttctcagccggagctcagaacaggcctcccttcacccgctcgcccggctaccac
aacaagtcttggccagggagtggagtctccctctctccacaccactcccccctccctcac
ccctcccatcactcccagcagggaaccagtgctgtgcaggcagagcatcatggacagggc
agcagcttcccgaccatgacagcaatggcagggatgggccccggggccgccggagtcccc
acaggtccctacagccagcagcagccgggcagtaactctggaaggatgacaccgcagggg
cccgtcctcagccagcagggggccccctactacgccccgccctcaggctccatgatgatg
tcagcagatgtgatggctgctcatccagacaccaagcagagggcggagctcagcaaagag
ggtgtggcctcttccacagaaccacccaaacctaagaagcccagtgtggccaccatgacc
agcgagaagatcacacggctgtacgagatgggctctgagcctgagaggaggccgtgggtc
gaccgctacctgtccttcatggaggagcgagggacggccgtcccacacctgcccgccgtc
ggcaagaagccgctggacctgtgtagactctacctgtccgtcagagacatcgggggactg
gccatggtgaataagaataagaaatggagggagctgtcgtcactgctgagtgtggggacg
tccagcagctcggccagttccctgaagaagcagtacatccactacctgttcgcctacgag
tgtcaggtggagcgtggggaggagcctccacccgaggggccggcccccagcggggacgcc
aagaaaccaacgtcactgcaggccaagatccagcccccgtccccagccaactccagctcc
ctgcaggggcccagcactcctcagtccagcagcagctccctgaccgaggcccccacggac
ctgaagcccccgacccccgcctccacaccacacggccagataggcccccagcccggaaac
aggaccatggtgagtgtccaggacccgttctctgaaggcagcgatccggctttccacaat
aagagaggggcgggtcctggaggggccccctaccagcagggaggaggtccagcagagtcc
ccgatgaggatgcagtacgatgccaacaaagacccatacggaggagtgaggaaaggtcct
ggacctggtgaggccttcggtcccagtcagatgcccggcgggtccatgcaggaaatgtat
cctcgcgggatcggacccagaccccagtactcgtacagtcccgggttcgagcgcagactg
gaccacgtgatgggaccagagggaggcgcggcgccccctgtgggtcagagtgggaacgag
gctggcatgttcccgtccagcaggttcccgcagcagagacacgacacctacgcgcagcag
ttccctcacaacatggcctacacttcccatcagcccctgtttcctcagcagcagggctac
aagcgaccgacggacggaatgttcccgccctctaagcgtcatgagggggaggggtttggc
gcacagcagtttggcgctcagcagcccgaaatgttcggcccgtcgtacggaggaggggga
ggagccgggggaggagcttacctgggttctgagcgacggccggtccagggtcagtatccg
tatccgtacggccgcgagcgcccgccgccgcagcacgtcctgctgggctcaggaccccca
gtgtccgggggccacggggaggggccccaggcaaacatatggccccccaggacagacctg
agctacacctacaacaggggtctgaaccgaggggaggagccagagggcagggcccccccg
gagagccagtggccccccggtcacctgggccagcgccagcccccctacccccccccacac
tcctcctcctcatcatcatcatcatcaccgtccatgccctccagaccacctctctcctct
ttccaagccacacccgctgtccctaaccacctgacccgctctcacagcccctccaccttc
ccccggcccatgggcggttctctgtccccgaacagtgccccatacctgccctctgtgaag
aaaccggcacttcctgctgtcggccccccgcccacccacagcctgccctccctcatcagc
agagactttagcttcccgcctggctctgtggaggccacgccccccagagtaaagccacgg
cgccgactcaccgccaaggacacaggaacgccggaggcgtggcgagtgatgatgtcactg
aagtccggcctcttagcagagagcacgtgggccctggacacgatcaacatcctgctgtac
gacgacaatagtgcaggctcattcatcctctcacagcttcctggtttccttgaactcgtc
gtggagtttttccgtcgatgcctgatccagatcttcggtctcctggaggagtacgaggtg
ggaggagccgagggccagggggcgctgttggtgcctcagccccacccccctcaacagcag
gaggcggggctgaaagagacaaatgaccaatcagcacaggagtgggtgaggagttcagag
gaggcgtcgccacttcacacgatgtctatgaccactgaggaggcggagtgtgcggagctc
cgccctccacaggccagcaagtatgacaaactaccaatcaaagtggaggagaaggaggag
gcgtggcaggaggtggaggagcgctgggcggagcttagcagacccaatggcttcatcagt
ggcctcctgcactggagagcagggggcggagactccactgcccacatccagactcacttt
gagccgcgcacactagactccgcccccccagaccctgcacagaggagagaggagagggag
caaggagacgaggacagggaggaagaggccggaggtcaaaggtcactcagtcagctggag
gatgagccgcgctgctgggacgcggcgccgctgtccacggccgagtcgtggcaggactcg
ctgtcgcggcgctgcgtgtgcgtctccaacgtgctgcgtggcctctccttcgtccctggc
aacgacggcgccatgtcgcgacacccgggcctggtgctgatcctgggccgcctggtgctg
ctgcaccaccgccacccacaccgcagacgcacgccgccctcctaccagcgggaggcggag
cgcggcctggcgtgcagccgcgacgagtggtggtgggagtgtctggcggcgctgcgggag
aacgcgctggtgacgctcgccaacatgtcgggtcggctggacctgtcgctgtacccggag
agcgtgtgtctgccgctgctggacgggctgctgcactggctggtctgtccggccgccgag
gcgcaggacccgtttgcagcggcggggggcggtccctcatcgtcactgacgccacagcgg
ctggtgctggagtgtctgtgcaagctgagcatccaggacgctaacgtggacctgctgctc
gccacgccgccattcagccggcagctcgaggtcttcggtacgctgctgcgactcatcggt
gagaggcggagtcaggtgtgtcgggagatggctgtggccgtcctcgctcacctggtgcag
ggtgacgcggcggcggcgcgggccgtggcccggctgaagggcagcgtgggaactctgatc
ggtttcctggaggacagtgttgccgtggcgcagtaccaccagagtccacacggcgcgctg
cacgccgcctccgtgccgccgccggagccacccagcgtcaacatgatgtgccgcgctgcc
aaggccctgctcgccatggcgacggtggaggagaaccgggcggagtttgtggtgcacgag
agtcgactgctggacgtgtcgctgtcggcggcgctgagctcgtctgtggcgtccgtcatg
tttgaggtgctgttcaaactcagccgctcgtga

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