Solea solea (common sole): 131443376
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Entry
131443376 CDS
T10853
Name
(RefSeq) squalene synthase-like isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
ssoe Solea solea (common sole)
Pathway
ssoe00100
Steroid biosynthesis
ssoe01100
Metabolic pathways
Module
ssoe_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
131443376
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ssoe01006
]
131443376
Enzymes [BR:
ssoe01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
131443376
Prenyltransferases [BR:
ssoe01006
]
Terpene biosynthesis
Squalene/phytoene synthase
131443376
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
131443376
NCBI-ProteinID:
XP_058468934
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Position
17:11096097..11103269
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AA seq
460 aa
AA seq
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MLAGACCKCPFSLSAFKRSLSVAPRGCGSASPPRSLLPGWRLGERGLQEAARARSAVRPA
SFYRHSAFFCLSCQESMSDSLRTCYVYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRAL
DTVEDDMTIPLDKKVPMLNDFHTFLYQDEWCFTESQEKDRQVLNDFPTISLEFRNLAQEY
RDVISDICHRMGVGMADFLEKKVGSMKEWDQYCHYVAGLVGIGLSQLFSASQLEDAEVGQ
DTKLANSMGLFLQKTNIIRDYLEDTQEGRAFWPKEAWSQFAGRLEDLAQPEKLESALSCL
NLLITDALRHVPDVITYLSRLRNQSVFNFCAIPQVMAIATLSSCYNNPMVFKGVVKIRKG
QAVTLMMEATNMRAVHTIISHHSEEILQKVSLTDPSRDKTLHILALIREKSTLSQSSFPS
RTHHLSPMYLSAAMLLAALSWQYLSTTAAQAQGTSDMQGK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgttggccggagcctgttgcaagtgtccattctctctatccgcgttcaagcgctctctc
tcggtggcgccgcggggctgcgggtccgcctcgccgccgcggtccctgctgccaggctgg
aggttaggggaacgcggcctgcaggaggccgcccgagcccgcagcgccgttagacccgcc
agcttttaccgacactcggccttcttctgtctctcctgtcaggagtccatgagcgatagt
ctgcggacctgttatgtgtacttgaaccagaccagccgcagctttgcagccgtgattcaa
gcactggacggggagttgagacacgcagtttgtattttctacttggtgttgcgagcgctg
gacacagtggaggacgacatgaccatccccctggacaagaaggttcccatgctgaatgat
ttccacaccttcctgtaccaggatgagtggtgtttcactgagagccaggagaaagaccga
caggttctgaacgatttccctacgatatcactggaatttcgaaacctcgcccaggaatac
agagacgtcatctcagatatctgccaccgcatgggagtgggaatggccgacttccttgag
aagaaagtgggatccatgaaggagtgggaccagtattgccactatgtggcaggtctggtt
ggcattggtctgtctcagctgttctctgcgtcccagctggaggatgctgaggtggggcag
gacaccaagctggccaactccatgggcttgtttctccagaagaccaacatcatccgggac
tatctagaggacacacaagagggacgtgccttctggccaaaagaggcttggagtcagttt
gcaggtcgtcttgaggacctggctcaaccggagaagctggagtcggctttgtcgtgtctc
aacctgctgatcaccgacgccctgcgacacgtcccagatgttattacgtacctgtcccgt
ctccgcaaccaaagcgtcttcaatttctgtgctattccacaggtgatggcaatagctaca
ttatcatcatgctacaacaaccccatggtgttcaagggagtggtaaagataaggaaggga
caggctgtcaccctcatgatggaggccaccaacatgagagcggtgcacaccattatctcc
caccacagcgaggagattttacagaaggtctccctcactgacccgtcacgggacaagaca
ctgcacatcctggctctcatccgggagaagtccacgctgtcacagtccagctttccctcc
aggacccaccacctgtcgcccatgtacttgtctgctgccatgctgctggccgcgctcagc
tggcagtatctcagcaccactgcggcacaggcacagggaaccagtgacatgcagggaaag
tga
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