Solea solea (common sole): 131443484
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Entry
131443484 CDS
T10853
Symbol
prpf39
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
ssoe Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssoe03041
]
131443484 (prpf39)
Spliceosome [BR:
ssoe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
131443484 (prpf39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
PRP6_TPR
TPR_19
DUF7877
CFAP70_TPR_C
HrpB1_HrpK
ARM_TT21
TPR_MalT
TPR_10
TPR_12
Motif
Other DBs
NCBI-GeneID:
131443484
NCBI-ProteinID:
XP_058469137
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All DBs
Position
17:7511877..7518523
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AA seq
788 aa
AA seq
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MEDTGPHLPDKTITGMLDSESPAMESNGDAFLPELPVLDQAGGDWSMSHVAPEPPTTILP
EESDTSQDVQQPALEMNSVEKAVEQFQLASAQLFQEVQPPQPTEEAAAAAPAPAQPSECN
AEAMDSEQPIQEMSVEPDAAVQDGSQDLTEAPQATEDGMELEEQSKETTDESTVPAEPEL
PSEFDKLFKGCEESPEDFNGWVYLLQYVEQENVLTAVRKAFDVFLLRYPYCYGYWKKYAD
IEKKHVNVQVAEEVYRRGLQAIPLSVDLWLHYLTFIKENSDPNDSDTEGHIRAAYEQSVL
AAGTDFRSDRLWESFINWETEQQKLANVTAIYDRVLGIPTQLYSQHFQKFKDHVQNNNPK
HFLSEDEFVRLRLELSKASLLSMVSNEDETPAVQEELPSGIEDLTDPAKRVTEIENMRHK
VIEVRQEVFNHNEHEVSKRWAFEEGIKRPYFHVKALEKTQLSNWKEYLDFEVENGTPERV
VVLFERCLIACALYEEFWTKYAKYLESYSTECVRHVYKKACTLHLPKKPAIHLLWAAFEE
QQGNAEEAREILKSLEVTVPGLAMVRLRRVSLERRHGNLEEAEVLLREAMESAKNTTEAS
FYAVKLARHLMKVQKSVSKARTVLLDAIEKDQASPKLYLNLLELEFGGDVTQNEAEILAC
FNQALNSQMPLESRLVFAQRKVEFLEDFGSDINVLVAAYDEQQKLLKESEPTKRKAENGY
DSSQEPDAKRQRAEDDSDATTATTDAQANNSAYNYNWYQQPYASWGQNSWGQYNQYAQYN
QYYPPPPT
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaccggcccacacctcccagacaaaacaattactggaatgctggacagtgag
tcccctgccatggagagcaacggggatgcttttcttcctgaacttcctgttctagaccaa
gctggtggtgactggtccatgagccatgttgctccagaaccacccacaaccatcttgccc
gaggaatctgacacctctcaagatgttcagcaacctgctctggaaatgaattctgtggag
aaggctgtggagcaatttcaacttgccagtgctcagcttttccaagaggttcagccacca
cagcccacagaagaagcagcagcagcagcaccagcaccagcacagccatcagaatgcaac
gcagaggctatggactcagagcaacccattcaggagatgagtgtagagcctgatgctgct
gtacaagatggcagtcaagatctgactgaggcaccacaagctacagaggacggcatggag
ctggaagaacaatccaaagagacaacagatgaatcaacagttcctgcagagccagagctt
cccagtgaatttgacaaactctttaaaggttgtgaggagagcccagaggacttcaatggt
tgggtgtacctgctgcagtatgtggagcaagagaatgtccttacagctgtaagaaaagca
tttgatgtattcctgcttcgctatccatactgctatggctattggaagaagtatgctgat
atagagaaaaagcatgtcaatgtacaggttgcagaagaggtgtacagaagaggtttgcag
gcaatccctctcagtgtggacctgtggctgcactacctgaccttcattaaggagaactct
gatcctaatgactcggacactgagggacacattcgagctgcctatgaacagtcggttctt
gcagcaggcacagattttcgctcggaccgtctgtgggagtcattcatcaactgggagaca
gagcagcagaagctggcaaacgtcactgccatctatgatcgcgtcttaggaatcccaacc
cagctatactcccagcactttcagaagttcaaagatcatgtacagaacaacaaccccaaa
cactttctctcagaggatgagtttgttcgactgagacttgagctctctaaagccagcctt
ttgtcaatggtcagcaatgaagacgagacacctgctgtccaggaggagctaccatcggga
atagaggatcttacagatcctgctaagagagtgacggagatcgagaacatgcgccacaaa
gtgattgaggttcggcaggaagtattcaaccacaacgaacacgaagtcagcaagcgctgg
gcctttgaggaagggattaaaagaccatacttccacgtcaaagccttggagaagacccag
ctaagcaactggaaggagtacctggactttgaggttgaaaatgggactccggagcgtgtg
gttgttctttttgaacgctgcctgattgcctgtgctctctacgaggagttctggaccaag
tatgcaaaatatctagagagctacagcactgaatgtgtgagacatgtctacaagaaggcg
tgcaccctccatttgcccaaaaaaccagccatccacctgctttgggcagcctttgaggag
cagcaaggcaatgccgaggaagctcgagaaatcctgaagtccttggaggtgacggtccca
ggtctagctatggtgcgccttcggagggtcagtctggagcgtcgccatggtaacttggag
gaagcagaggtgctgttacgggaggccatggagtctgcaaagaataccactgaggcatcg
ttctacgctgtgaagctggcaaggcatctgatgaaggtgcagaaaagtgtgagcaaagca
agaacggtactgctggatgctatcgaaaaagaccaggcaagtccaaaactgtacctgaac
ctgcttgagctggagtttggtggggatgtgacgcagaatgaggcggagatcttggcttgt
ttcaaccaggcacttaacagccagatgccccttgaatcccgcctcgtctttgcgcaacgc
aaagtcgagttccttgaagactttggcagtgacatcaatgtgcttgtggctgcatatgat
gaacagcagaaacttctgaaagaaagcgaacccacaaagaggaaagctgagaatggttat
gacagttcccaggaacctgatgctaagagacagcgtgcagaagatgattcagatgcaaca
actgcaacgacagatgcgcaggcaaacaactctgcatacaactacaactggtaccagcaa
ccatacgccagctggggacagaactcctgggggcagtacaatcaatatgcccagtataac
cagtactaccctcctcctcctacatga
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