Solea solea (common sole): 131443962
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Entry
131443962 CDS
T10853
Name
(RefSeq) squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
ssoe Solea solea (common sole)
Pathway
ssoe00100
Steroid biosynthesis
ssoe01100
Metabolic pathways
Module
ssoe_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
131443962
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ssoe01006
]
131443962
Enzymes [BR:
ssoe01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
131443962
Prenyltransferases [BR:
ssoe01006
]
Terpene biosynthesis
Squalene/phytoene synthase
131443962
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
SPATA9
Motif
Other DBs
NCBI-GeneID:
131443962
NCBI-ProteinID:
XP_058470046
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All DBs
Position
17:11107658..11117460
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AA seq
419 aa
AA seq
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MDILKSLGHPEELYNLFKFKLGGCSSVMTKLDHESMSESLRTCYVYLNQTSRSFAAVTQA
LDGELRHAVCIFYLVLRALDTVEDDMTIPLDKKVPMLNDFHTFLYQDEWCFTESQEKDRQ
VLNDFPTISLEFRNLAQEYRDVISDICHRMGVGMADFLVKKVGSMKEWDQYCHYVAGLVG
IGLSQLFSASQLEDAEVGQDTKLANSIGLFLQKTNIIRDYLEDTQEGRAFWPKEAWSQFA
GRLEDLAQPEKLESALSCLNLLITDALRHVPDVITYLSRLRNQSVFNFCAIPQVMAIATL
SSCYNNPMVFKGVVKVRNGQAVTLMMEATNIRAVHTIISHHSEEILQKVSLTDPSRDKTL
HILALIREKSTLSQSSFPSRTHHLSLIYLSAAMLLAALSWQYLSTTATQAQGTSDMQGK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggacatcctgaagtcactgggtcaccccgaggaactatacaacctgttcaaattcaaa
ctcggcggatgcagctccgtcatgaccaagttggatcatgagtccatgagcgagagcctg
cggacctgttatgtgtacttgaaccagaccagccgcagctttgcagccgtgactcaagca
ctggacggggagttgagacacgcagtttgtattttctacttggtgttgcgagcgctggac
acagtggaggacgacatgaccatccccctggacaagaaggttcccatgctgaatgatttc
cacaccttcctgtaccaggatgagtggtgtttcactgagagccaggagaaagaccgacag
gttctgaacgatttccctacgatatcactggaatttcgaaacctcgcccaggaatacaga
gacgtcatctcggatatctgccaccgcatgggagtgggaatggccgacttccttgtgaag
aaagtgggatccatgaaggagtgggaccagtattgccactatgtggcaggtctggttggc
attggtctgtctcagctgttctctgcgtcccagctggaggatgctgaggtggggcaggac
accaagctggccaactccataggcttgttcctccagaagaccaacatcatccgggactat
ctagaggacacacaagagggacgtgccttctggccaaaagaggcttggagtcagtttgca
ggtcgtcttgaggacctggctcaaccggagaagctggagtcggctttgtcgtgtctcaac
ctgctgatcaccgacgccctgcgacacgtcccagatgttatcacgtacctgtcccgtctc
cgcaaccaaagcgtcttcaatttctgtgctattccacaggtgatggcaatagctacatta
tcatcatgctacaacaaccccatggtgttcaagggagtggtaaaggtaaggaatggacag
gctgtcaccctcatgatggaggccaccaacattagagcggtgcacaccattatctcccac
cacagcgaggagattttacagaaggtctccctcactgacccgtcacgggacaagacactg
cacatcctggctctcatccgggagaagtccacgctgtcacagtccagctttccctccagg
acccaccacctgtcgctcatttacttgtctgctgccatgctgctggccgcgctcagctgg
cagtatctcagcaccactgcgacacaggcacagggaaccagtgacatgcagggaaagtga
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