Solea solea (common sole): 131444521
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Entry
131444521 CDS
T10853
Name
(RefSeq) AT-rich interactive domain-containing protein 1B-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131444521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssoe03000
]
131444521
03021 Transcription machinery [BR:
ssoe03021
]
131444521
03036 Chromosome and associated proteins [BR:
ssoe03036
]
131444521
Transcription factors [BR:
ssoe03000
]
Eukaryotic type
Helix-turn-helix
ARID
131444521
Transcription machinery [BR:
ssoe03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
131444521
Chromosome and associated proteins [BR:
ssoe03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
131444521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
131444521
NCBI-ProteinID:
XP_058470888
LinkDB
All DBs
Position
18:3720191..3924989
Genome browser
AA seq
2369 aa
AA seq
DB search
MAAQVASAPTRTNNKNKKLPSGLGPELNSGKSGGGGGGGTVQRIGPMLGAGDGTLNNVDH
HRRNELNMVHSTSTTHGAPDGHDKDGNNLTSNSASTNSTTSSMETGLIANHKLKCVGSGD
PPQSQPLPQQQQPLQFGQFTPHQQRQIQSNNTVNNNGQGPRGDRGMDHQHHGGKENLLGE
PQQQHMSGKGEGELTCKPAERMTTSRYEQSNLGPNSNNSEFNNNYYTPRPCYDQHGGQQQ
QSSGMGITHSSAHNSMENSHDAGFHNSQYNHQYPAYRASYGGGAYGMMGPTGCRQPGNMM
MGSNSNTGHGKAPLGPGSSGFQRFPGQTQQQQQQQHHPSGATPTLNQLLTSPSPMMRGYG
GAYQDFSGPTSQQQQQQQQAGMSLAKDVGPQYGPASAHGWGGQQRNHPHSMSPGNGGQGL
GRTQVSSMDFMAMKRSQLYGMANNPYSAPQQPGGGPYPPNQPYTSPPPHRYPMGMQGRGQ
MGLGGMQYPQQQQVAPYGQQVMGGYSQQQQQQQQQQQAGQQGTPPYFSPPQQTPPGPRES
PYLQPRPPPQQEAQQESYNSRGPAPGNSGKANNEDGVSHDRPCSLPDLSGSIDDLPTGTE
AGLGSAVSAGGSSSSSSSSSQGEQGAASNQGQSPFSPHASPHLPSQRSGPSPSPVGSPAG
STLSQQSRSGSGPISPASGPSANSTTAAPGSTVATQNTGNGPDGGHPPNTRSPMAQDRGF
MSGMQRNQTASQFASPQSGPSMSPHPSPGAPLYPGMVPYSQSGPTGAYGPQGSQYGPQGN
YPRPSNYNSTASASYSGPGMTNSLGMNASSPMHGQGPGQPVPVGRSPGPGSQNRVYPPMA
PSSPSMPQPAGPGMGPPSLGGSNRKVQEAAAAAGMPGSANSTHNRRPPYVRSPAQTQPTQ
PTSTHWPAPHPASICPHPSPPPPPPPPRPQHPSILPPSHSHLHRQSSYQGPPNVNQASNM
ASTVPYNQPAANNASALGNSQVPAYSAQPSGAISTSGDGVMSPNGKPKTDVKEDTGPAHE
PHKPKQQDGYSNNNNNSSSGSQQCVSQPTTPGGALPVPSPLSPSPASLSSYHGDDSDSIS
SPPWPLKTPASPKPNPNPSSLSGERIARLYELGAEPERRSWVERYLTFMEDRGTPVAQLP
AVGKKPLDLWKLYMAVREIGGLAMVNKNKKWRELSTNLNVGTSSSSASSLKKQYIQYLFA
YECKMERGEEPPADSSSSSSSGSSSSSSMAGGENRKQVKIQPPSPANSGGSLQGPQTPQS
SGSSSAAEAAGDLKPPTPATTPLGQVTPLPPNRSSVSVQDPFSEVSDPAFQKRAPSLPPT
APYQQGLSMPDMMMRMQYDAKDPFAGMRKMAGADPYMPGQMPSGGMQEMYGRPPSALSMN
QRSQYPYGPGYDRRPDHVMGMEGSMGPPGSQNNLGPSNSEGNMYSPSRYPSQQRHDGYGQ
QYPSMPYGIHPSGMYPQQQQGYKRPMEGMYGPPPKRHESDMYAMQYANQQPDMYNHYTGG
YSGPEHRPLQGHFPYPYPRDRMGHSGQSQHSMMGGGPTVNHTTDGPNMWPSRTDLGYPYP
NRQGPPSQMTPYGSIGRDDMDVRPGQEPWPRQSPYMSSSGGMPPLSSRQPSSYSNSSSMG
NHLPRAPSPGAFQRSLDSRMSPGKVPFMSAMKMPKPGMAMMPSQGSGPLGQFPPNLRRDL
NYPQGSIEATMPMLKPRRRLTSKDTGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDN
TVASFNLSQLPGFLELIVEYFRRCLIEIFGILEEFEVGTVAHKSFLDSASNHAGEEEEEE
EKEKEKEEEQISDQEKDCAVKPESELAPAKETQVQRVEVVTDEAPPTAAETAVVNGDMEE
EEVNVKKEDKNKEEEEKDKKEEESEKGAESKTESLDKPVTDLEPKPKQASKYDKLPIKIV
HKEDLVEDMTKHLGYITEFTSGLLHWQAGGGDSTAHIQTHFEPRLAPPASTDEKMRKESK
QENAAQDEGKQPRKHITATIDDVLCARVDALSYTHPARSLPSYPFRVHADGEPDYITLLE
DEPRCLDEAPLSTASSWQDSLSKRCLCISNIVRSLSFIPGNDSDMSRHPALVLLLGRLLL
LHHQHPERNRSQPSYLRDEQQERGLSSNKEEWWWECLSLLRENAMVTLANISGQLDLSTY
SDTICLPVLDGLLHWMVCPSAEAQDPFPSAAPHSQLTPQRMVLECLCKLSIQDGNVDLLL
ATPPFSRQEKLFTVLVRYVSQRNTQVYREMAVAVLSHLAQGDPTAARAIAMQKGSVGNLV
GFLEDGVSMAQYQQNPHSLLHMGHPPMDPPSINMMCRAAKGLLAMAKVGENKREFVLYES
RLLDISISPVLSAGVAAIICQVLFHLGKL
NT seq
7110 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcaagtggcatcggctccgaccagaactaataacaaaaataagaaattaccc
agcggtttgggtccggagctcaactcggggaaatccggaggaggaggaggaggagggacc
gtgcagcgaattggaccgatgctgggagccggagatgggactctgaataatgtagaccat
caccgccgaaacgagctcaacatggtccattcaacttccacgactcacggcgcgccggac
ggccacgacaaggatggaaataacctcacgtctaactcggcgtcgactaattcaaccact
tcctcgatggaaacgggtttgatcgcgaaccacaagctgaagtgtgtggggagcggagat
ccccctcagtctcagccgctgcctcagcagcagcagccgctgcaattcggccagtttacg
ccacatcagcagcggcagatccaaagtaacaacactgtcaacaacaacggccaggggccc
cgtggagacagaggcatggatcaccaacaccacggcggcaaagagaacctgttgggggag
ccacagcagcagcacatgtcaggtaaaggtgagggggagctcacctgtaaacctgcggag
aggatgacgacctccaggtacgaacagtctaacttagggccaaacagtaacaactctgag
tttaacaacaactattacaccccaaggccctgttatgatcaacatggcggacagcagcag
caaagcagcgggatggggataacgcactcctcggcgcacaacagcatggagaattcccac
gacgcaggtttccacaacagccagtacaaccaccagtacccggcataccgggcgagctac
ggcggtggggcctacgggatgatgggccccactggatgccgccaacctgggaacatgatg
atgggcagcaactcaaacacaggccacggcaaagctcctctgggacctggttctagtggc
tttcagcggttcccggggcaaactcagcagcagcagcagcagcagcatcacccctcgggt
gccacaccgaccctcaaccagctgctgacgtcccccagccccatgatgcggggctatggt
ggtgcctatcaagactttagtggccccacatcgcagcagcagcagcagcagcagcaggct
ggcatgagcctggccaaggacgtggggccccagtatggacccgcatctgctcacggctgg
ggaggacaacagaggaaccacccgcattcaatgagcccgggtaacggaggacaaggcctc
ggcaggacgcaggtgtcctccatggactttatggctatgaagcggtcgcagctgtacggc
atggccaacaatccttactccgctccacagcagccagggggtggaccataccctcctaac
cagccatatacgtcgccgccgccacaccgctatccaatgggcatgcaggggaggggccaa
atgggcctgggcggaatgcagtatccacagcaacagcaggtggcgccgtatggccagcag
gtgatggggggctacagccagcagcagcagcagcagcagcagcagcagcaggcagggcag
cagggaacacctccgtacttcagcccccctcagcagacgcctccaggccccagagagagc
ccctacctccagcctcgaccacctccacaacaggaggcccagcaggagagctacaactcc
aggggtcctgccccagggaactctgggaaagcgaacaacgaagacggcgtctcccacgac
cgcccctgcagtctgccggacctgtccggctccattgatgacctccccacagggacggag
gccggtctgggctcagccgtcagcgccggtggctcgtcctccagcagcagcagcagcagc
cagggggagcagggagccgcgagtaaccagggacagtcacctttctccccgcacgcctcc
ccacacctccccagccagaggagcgggccctctccctcacctgttggctcgcctgcaggc
tccaccctgtcccagcagtcccggtctggttctggacccatctctcctgccagtggcccc
tctgccaactccaccaccgccgcaccaggctccactgtggccacacagaacactggaaac
ggaccggatggaggccacccaccaaacacccgctcacctatggctcaggacagaggattc
atgtccggcatgcagaggaaccagaccgcctcccagtttgcgtcacctcagtccggaccc
tccatgtccccacacccttcacccggggccccgttgtatcctggaatggttccgtactcc
caaagcggtcccacgggcgcctatggaccacaaggatcacagtatggacctcaagggaac
taccctcggccctccaactataatagcacggccagtgccagctacagcggcccgggcatg
accaacagccttggaatgaacgcaagcagcccgatgcatggccaaggtcccggccagccc
gtacctgtgggtcgtagcccaggcccaggcagtcagaacagggtgtatccgcccatggct
cccagctctcccagcatgcctcagccagctggtccgggcatgggcccgccttctttgggt
ggttctaaccgcaaggttcaggaggcagcagcagccgctggaatgccgggatctgccaac
tcgacacacaacaggcggcccccatatgtcaggtccccagcacagacgcagccaacacaa
cctacctccacccactggcctgcacctcaccctgcctccatctgtccacatccttctcct
cctcctcctcctcctcctcccagacctcagcacccatccatcctgccaccctcacactca
cacctccataggcagagcagctatcaaggcccccccaacgtcaaccaagcaagcaacatg
gcctccactgtcccctacaaccagccagcagccaacaacgcctcagctttgggaaactca
caagttccagcctacagtgcacagccttcaggagctatatcgacgtcaggagacggcgtg
atgagtccaaacgggaagccaaaaacggacgtgaaagaggatacaggccccgcccacgag
cctcacaaaccaaagcaacaggacggctacagcaacaacaacaacaacagtagcagtggc
tcccaacagtgtgtgtcgcagcccaccacgccaggtggtgccctgcccgtgccctcgccg
ctctcgcccagccccgccagcctgtcgtcctatcacggagacgacagcgacagcatcagc
agccccccatggccgctcaagacgcccgccagccccaaacccaaccctaacccctcctct
ctcagtggggagcgaatcgcacgcctttacgagctgggcgcggagccggagaggcggagt
tgggtggagcgttacctgaccttcatggaagacagaggcacgcctgtcgcccaactgccc
gccgtgggcaagaagccgctcgatctgtggaagctctacatggctgttcgtgagatcgga
ggcctcgccatggtgaacaaaaacaagaagtggcgtgagctgtccaccaatctgaacgtc
ggcacgtcgagcagctccgccagctccctcaagaagcagtacatccagtatctgttcgcc
tacgagtgtaagatggagcggggagaggagccgccggcagacagcagcagcagcagcagc
agtggcagcagcagcagcagcagcatggctggaggggagaacaggaagcaggtcaagatc
cagccgccgtcacctgcgaattcaggcggctcactccaaggtcctcagacgccgcagtcg
tctggcagcagctctgcagcggaggcggcgggggatctgaagccgcccacacctgctacc
acccctctgggacaggtcacgccactgccccccaacaggagtagtgtgagtgtgcaggac
cccttctctgaggtgagtgacccggccttccagaagcgtgctccctccctgcctcccacc
gctccttaccagcagggcctcagcatgcctgacatgatgatgaggatgcagtatgatgcc
aaggacccgttcgccgggatgaggaagatggcaggagctgatccctacatgccgggccaa
atgcccagtggtggcatgcaggaaatgtacggtcgacccccatctgcactgagcatgaac
caaaggtcacagtatccgtacgggccgggctacgacaggaggccggaccatgtgatgggg
atggaggggagcatgggtccccctggaagtcagaacaacctgggtccttccaacagtgaa
ggcaacatgtactctcccagcagatacccttcacagcagagacacgatggctacggtcag
cagtatcccagcatgccgtatggaatccatccttctgggatgtacccgcagcagcagcag
ggctacaagcggcccatggagggcatgtacggccccccgcccaagaggcacgagagcgac
atgtacgccatgcagtacgccaaccagcagccagacatgtacaaccactacaccggtggc
tactcgggccccgaacacagacccctgcagggacattttccctacccttacccccgtgac
cgcatgggccattctggacagagccagcacagtatgatgggtgggggccccacagtgaac
cacaccactgacgggcccaacatgtggccgtccaggacagacctgggctatccttacccc
aaccgacaggggccgccgtctcagatgacaccgtacggctcgatcggcagagacgacatg
gacgtgcggcccgggcaggagccgtggccccgtcagtcgccctatatgtcgtcgtcgggg
gggatgcctcctctgtcgtcacgccagccgtcgtcttactccaactcctcgtccatgggc
aatcacctgcccagggcccccagcccgggagctttccagcgatctctggactctcggatg
tcacccggcaaagtgccgttcatgtccgccatgaagatgcctaagcctgggatggcgatg
atgccctcgcagggcagcggacccctgggccagtttcctcccaacctgaggagggatctc
aactacccacaaggatcaatcgaggccaccatgcccatgctgaagcctcggcgcaggctt
acctccaaagacactggaacgcctgaggcgtggcgtgtcatgatgtctctgaagtcgggt
ctgctggcagaaagcacgtgggctctagacaccatcaacatcctgctgtatgacgacaac
accgtggcctcctttaacctctcacagttacctggattcctcgagcttatcgtggaatac
ttccgccgctgcctgattgagatctttggcatcctggaggagtttgaggtggggactgta
gctcataaaagctttctggattctgcttctaaccacgcaggagaagaagaagaagaagaa
gaaaaagaaaaagaaaaagaagaagagcaaatctcagaccaagaaaaagactgtgctgtt
aaacctgaatcagagttggccccagctaaagagacgcaagtgcagcgggtcgaagttgtg
acggatgaagctccgcctactgctgcagagacggctgtggtgaacggtgacatggaggag
gaggaggtgaatgtcaagaaggaggacaagaacaaagaagaagaggagaaagacaagaaa
gaagaagagagtgaaaagggggcagagagtaaaactgaatctctggataagcctgtcaca
gacctggaacctaaacctaaacaggccagcaagtacgataagctcccgatcaagatcgtc
cacaaagaggacctggttgaagacatgacaaagcacttaggttacatcactgagttcacg
agtgggctgctgcactggcaggctggtggaggcgactccactgcgcacattcagacacat
tttgaaccccggctggcgccgcccgcgagcacggacgagaagatgagaaaagagagcaag
caggagaacgcggcgcaggacgaaggcaagcaaccacggaaacatatcaccgcgaccatc
gatgatgtcctgtgtgctcgggttgacgccctctcatacacccaccccgcacgctccctg
ccgtcctaccccttcagggtgcacgccgatggggagccggactacatcacgctgctggag
gacgagccgcgctgcttggacgaagcgccgctctccacagcgtccagctggcaggactcg
ctgtccaagcgctgcctctgcatctccaacatcgtcaggagcctgtccttcatcccgggc
aacgactcggacatgtcgcgccaccccgccctagtcctcctgctgggcaggctgctcctg
ctgcaccaccagcacccagagaggaaccggtcacagccgagctacctgcgggacgagcag
caggagcgcgggctgtcgagtaacaaggaggagtggtggtgggagtgtctgagtctgctc
agggagaacgccatggtcacgctggccaacatatccgggcagctggacctctccacttac
tcggacactatctgcctccccgtcctggatggactactccactggatggtgtgtccctcc
gctgaagcccaggaccccttcccgtcggcggcacctcactcgcagctcactcctcaaagg
atggtgctggaatgcctctgcaagctcagcatccaggacggaaacgtggacctcctgctg
gccacgccaccgttcagccgccaggaaaaactgtttacagtcttggttcgctatgtgagt
cagaggaacacccaggtgtaccgggagatggcagtggccgtcctctctcacctggcacag
ggggatcccacggcagcgcgcgccatagccatgcagaagggcagcgtgggtaatttggta
ggcttcttggaggatggcgtgagcatggcacagtaccagcagaaccctcacagcttgctg
cacatggggcatccgcccatggacccgccgagcattaacatgatgtgcagagcagccaaa
ggcctgttggccatggctaaagtgggcgagaacaagagggagtttgtgttgtatgagagc
agattattagacatctccatctcgccggtgctcagcgcaggagtggcggccattatttgc
caagttctctttcacttggggaagttatga
DBGET
integrated database retrieval system
