KEGG   Solea solea (common sole): 131444858
Entry
131444858         CDS       T10853                                 
Name
(RefSeq) probable histone deacetylase 1-B isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
ssoe  Solea solea (common sole)
Pathway
ssoe03082  ATP-dependent chromatin remodeling
ssoe03083  Polycomb repressive complex
ssoe04110  Cell cycle
ssoe04330  Notch signaling pathway
ssoe04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:ssoe00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    131444858
   03083 Polycomb repressive complex
    131444858
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    131444858
   04350 TGF-beta signaling pathway
    131444858
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    131444858
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ssoe03036]
    131444858
Enzymes [BR:ssoe01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     131444858
Chromosome and associated proteins [BR:ssoe03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     131444858
   HDAC complexes
    Sin3A-HDAC complex
     131444858
    BRAF-HDAC complex
     131444858
    REST complex
     131444858
    SHIP complex
     131444858
    MiDAC complex
     131444858
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     131444858
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    131444858
  Chromatin remodeling factors
   NuRD complex
    131444858
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 131444858
NCBI-ProteinID: XP_058471525
LinkDB
Position
18:2647399..2651608
AA seq 490 aa
MALTSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
SGEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSGGGSIA
GAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEA
IFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLG
GGGYTIRNVARCWTYETAVALDSPIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNDYL
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVQEDSGDEEEDDPNKRISIRAHDKRIACEEE
FSDSEDEGEGGRRNAASFKKAKRVKTEGEKEGEEKEKKGEEETKEVKVEEKVPEEEKMDT
SKPKEESKTP
NT seq 1473 nt   +upstreamnt  +downstreamnt
atggcgctcacttctcaaggaacaaagaaaaaagtttgctactactatgacggtgatgtt
gggaactattactatggacagggacatcccatgaagccccacaggatccgcatgacacac
aaccttttgctcaactatggcctctacagaaagatggagatctatcgtccccacaaagcc
agcggggaggagatgaccaagtatcacagtgacgattacatcaaattcctgcgttcaatc
cgaccggacaacatgtcggagtacagcaaacaaatgcagagatttaatgtcggtgaggac
tgtcctgtgtttgatgggttatttgagttctgccagctctctggaggaggctctattgct
ggtgctgtgaagttgaacaaacagcagacagacatcgctatcaactgggctgggggtctg
catcacgccaagaagtccgaggcctctggattttgctacgtcaacgacattgtactggcc
attctggaattactgaaataccaccagagagtcctgtacatagatattgacatccatcat
ggagatggtgtggaggaggccttctacaccaccgaccgcgtcatgaccgtttccttccac
aagtacggagagtacttccctggcaccggcgacctgagagacattggtgctgggaagggc
aaatattatgccgtgaattatccactgagggatgggatcgacgatgagtcgtatgaagcc
atattcaaacctatcatggctaaggtgatggaaatgtaccagcccagtgcagtggttctg
caatgtggagctgattctctgtcaggagacagactcggctgctttaacctcaccatcaaa
ggtcatgccaagtgtgtggagtacatgaaaagcttcaacctgcccctgctgatgctgggc
ggaggcggctacaccatccgcaacgtggctcgctgctggacgtatgaaaccgctgtagca
cttgattcccccatccccaatgagcttccatacaatgactactttgagtactttgggcct
gacttcaagctgcatatcagcccctccaacatgaccaaccagaacaccaacgactacctg
gagaagattaagcagcgcttgtttgaaaacctgcgtatgctgcctcatgcaccaggagtg
cagatgcaggctattcctgaagatgctgtgcaggaggacagtggagacgaggaggaagac
gatcccaacaaacgcatctccatccgcgctcatgacaagaggatagcgtgtgaggaagag
ttctctgactctgaggacgaaggtgaaggaggtcgcaggaacgcagccagcttcaagaaa
gccaagcgagttaaaaccgagggcgagaaagagggagaagaaaaggagaagaaaggtgag
gaggaaacaaaagaagtcaaagtagaggagaaagtgccggaggaagagaaaatggacaca
tccaagccaaaagaggaatccaagactccttga

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