Solea solea (common sole): 131445806
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Entry
131445806 CDS
T10853
Symbol
rnf180b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180 isoform X1
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
ssoe Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssoe04121
]
131445806 (rnf180b)
Enzymes [BR:
ssoe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131445806 (rnf180b)
Ubiquitin system [BR:
ssoe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131445806 (rnf180b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
RING_XB3-XBAT31
FYVE
Baculo_IE-1
Afi1
Motif
Other DBs
NCBI-GeneID:
131445806
NCBI-ProteinID:
XP_058472450
LinkDB
All DBs
Position
19:complement(1247570..1253210)
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AA seq
522 aa
AA seq
DB search
MMLRCRKCRKGVIDSTCLTTEEATDEGSAAVCSIWHVNVDALPQWILTSLHQAQWTVGKL
KCLNCGARLGGFNFVNRSKCPCGRDANVHLSKSRVDSDHKHNAFIVRPRDARLETSLALP
PTGDSENNEDSLSVAGPSDATDGKNTTSFPLSRLHCVSHSRRCSVEDDATFRSSCFCTSV
VRERPVVDLTMADRQTDDESTLLPVSRPSTQETDTDADDVVAVTSLVSGGRQLQTVEAVE
SSVETTTVHQEDSDSTLFLRGRTAEDEGTELRASSASRSLSRREKNRLKSQRRKQRRRER
WLLSQQQADVDSDGEEEEKEKEKEEDRENLTCTVCLDVYFRPHSCEPCGHVFCELCLRTL
AKNRHTKTTCPLCRTLISHTDLHTELDQAAKTSFPKVYLACQQNFTNALCAKWPLPSGRK
RFWGKKLTKIPLVFMLLFRLNRVCITLSPHRKQLLSTRSEPFIMTCNSCNLIMTRTHAAV
TTLLNTLQMLVFVTLLTILISLTVNSIQVFFFMLGSDYTICS
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgatgcttcgctgcaggaagtgtcggaaaggcgtcatagactcaacgtgtttgaccaca
gaggaggccacagatgaaggctcagctgctgtttgcagtatttggcacgtgaatgtcgac
gcgctgccacagtggatactgacgtcacttcaccaggctcagtggactgtggggaaactg
aaatgtctcaactgcggagctcgtttgggcggcttcaactttgtcaatcgcagtaaatgt
ccctgcggccgggacgccaacgttcacctcagcaaaagccgcgtggactctgaccacaag
cacaacgctttcatcgtccggccgagggacgcaaggctcgagacgagtcttgctcttcct
ccgacaggcgactctgagaacaacgaggacagtctgtcagtcgccggcccctcagacgcc
actgatggtaaaaataccacctcgtttcctctcagtcgcctgcactgtgtctctcacagc
agaaggtgcagtgtggaggatgacgccaccttcaggtcttcatgtttttgtacttcagtt
gtcagggaaaggccggttgtcgatttgacaatggcagacagacagacagacgatgagtct
acactgttacccgtctcgcgtccttcaactcaagagactgacacagacgctgatgatgtc
gttgctgtcacttcacttgtttctggagggcggcagctgcaaactgtggaagcagtggaa
tcatctgtggagaccacgactgttcaccaggaagattcggattctacacttttcctcaga
ggacgaaccgctgaagacgaaggaacagagcttcgagcctcgtctgcgtcgaggagcctg
agcagaagagagaagaaccgtctgaagtctcagcggcggaaacagaggagaagagagcga
tggctgctcagtcagcagcaggctgatgttgacagtgatggtgaggaggaggagaaggag
aaggagaaggaggaggaccgagagaacctcacctgcaccgtgtgtctggacgtctacttc
cgtccacacagctgcgaaccctgcggccacgtcttctgcgagctgtgtctccgcacgctc
gccaagaaccgacacacgaagaccacttgccctctgtgccgcaccctcatctcacacacc
gacctccacacagagttggaccaggctgcaaagacctccttccctaaagtttacctcgcc
tgccagcagaacttcaccaacgcactgtgtgcaaaatggcctctgcccagcggtcgcaaa
cgcttctggggtaagaaactgacgaagattcctctggtttttatgcttttgttcagacta
aatcgggtttgtatcactttgtcaccccacagaaaacaactactaagcacaaggtctgaa
ccatttataatgacctgtaattcatgtaatttaataatgacacgcacacatgctgccgtc
accactcttttgaatacactgcaaatgttagttttcgttactttattaacaattttaata
agtcttactgtaaacagcattcaagtatttttttttatgctaggatcagactacacgata
tgttcataa
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