Solea solea (common sole): 131446086
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Entry
131446086 CDS
T10853
Symbol
prpf4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131446086 (prpf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssoe03041
]
131446086 (prpf4)
Spliceosome [BR:
ssoe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
131446086 (prpf4)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_EML
WDR90_beta-prop_4th
PRP4
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_RIG_2nd
WD_LRWD1
Ge1_WD40
Beta-prop_IFT140_1st
Beta-prop_Vps41
eIF2A
WD40_like
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_WDR11_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
131446086
NCBI-ProteinID:
XP_058473062
LinkDB
All DBs
Position
19:18385029..18389608
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AA seq
508 aa
AA seq
DB search
MSDDEDGPPIVKRSRVYYGSLEEKERERLVRGGSMSSRSSAVKAGIDAGNINISSGETME
MEERVNEHQHEALAAFERRRRARQITVSTDDAEVKAGLRALGEPITLFGEGPADRRERLR
SVLSVVGPDALKKSRKDEERAKRSQEECQQTWYHEGPASLKEARLWLAKYSLPRAVERLD
AARAQKEVAEATKAMRQQEQHKTLRNLNNFCSQIGDDRPISFCHFSPDSKMLATASWSGL
CKLWSVPDCSLIRTLRGHNTNVGAIVFRPQAGVSLDHSDVCLASCATDGSVKLWNLESDE
PVADIEGHDERVSRVTWHPSGRFLGTTCYDKSWRLWDLEVQEEILHQEGHSKGVHDLHFH
PDGSLTATGGLDAFARVWDLRTGRCVVFLEGHLKEIYSVNFSPNGYHLATGSGDNTCKVW
DLRNRRCLYTIPAHQNLVSAVRFQPTDGHFLLTGAYDNMAKIWTHPGWTPLKTLAGHEGK
VMGVDVSPDGKLIATSSYDRTFKLWLSE
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgacgaggacgggcctccgatcgtgaagaggagccgcgtttactatggaagc
ctggaagagaaagagcgcgagcgcctggtcagagggggcagcatgtcatcaagaagtagc
gcggtgaaggcggggatcgatgcagggaacatcaacatatcctcaggagagactatggag
atggaggagcgggtcaacgagcatcagcacgaggcgcttgctgcgtttgagcggcggcgg
cgagcacgacaaatcacagtctccactgacgacgccgaggtcaaagcgggcctccgcgcc
cttggcgaaccaatcacattgttcggagagggaccagctgatcgtcgagagaggctgcga
agtgtcctctctgtggtcggtccagatgctctgaaaaagtccaggaaagacgaagaacga
gccaagaggtcacaggaagagtgccagcagacatggtaccacgaaggcccagcctccctg
aaggaagctcgcctctggttggccaaatactctctgccacgggcagtggagcgtctggac
gctgcacgtgctcagaaggaggttgccgaggcaaccaaggcgatgcggcaacaagaacag
cacaagacccttaggaatctgaacaacttctgcagtcagatcggagatgaccgaccaatc
agcttctgccacttcagccctgactccaaaatgctggccacagcttcctggagtggtctg
tgtaagctgtggtccgtccccgactgcagtctgatccgtacactcagaggacacaacacc
aacgtcggtgccatcgtcttccgtcctcaggctggagtctctctggaccactcggacgtt
tgcctggcgtcgtgtgcaactgatgggtcagtgaaactgtggaacctggagagtgacgag
ccagtggctgacattgagggtcacgatgagcgcgtgtcgcgggtaacctggcatccatct
ggaaggttcctgggaacgacctgttatgataaatcgtggcgtctgtgggacctcgaggtt
caggaggaaattctccatcaggaaggtcacagcaaaggagtccacgacctgcacttccac
ccagacggttcactgacagctactggaggcctggatgcgtttgctcgtgtttgggatctt
cgaactggacgctgtgtcgttttccttgagggacatttgaaggagatttacagcgtgaac
ttctctcccaacgggtatcacttggcaacaggaagtggtgacaacacctgtaaggtttgg
gacttgagaaacaggaggtgtctgtacacaattcccgcccaccagaacctggtgtctgct
gtccgctttcaacccactgacggtcatttcctgttgaccggggcttacgacaacatggcc
aaaatctggactcaccctgggtggacgcctctgaagactctcgctggacacgaggggaag
gtgatgggcgtcgacgtgtcgcccgacgggaaactgattgcaaccagttcatacgaccga
accttcaaactgtggctgtctgagtga
DBGET
integrated database retrieval system
