Solea solea (common sole): 131446123
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Entry
131446123 CDS
T10853
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
ssoe Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssoe03021
]
131446123 (chd1)
03036 Chromosome and associated proteins [BR:
ssoe03036
]
131446123 (chd1)
Transcription machinery [BR:
ssoe03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
131446123 (chd1)
Chromosome and associated proteins [BR:
ssoe03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
131446123 (chd1)
SLIK complex
131446123 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
HDA2-3
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
131446123
NCBI-ProteinID:
XP_058473120
LinkDB
All DBs
Position
19:complement(2857949..2886211)
Genome browser
AA seq
1819 aa
AA seq
DB search
MAGRSENESVSNSSGESSNSDDESGSGSGSASGSGSGSSSSSSSSSSQSGSSDSGSGSDS
GSQSDSDAEKSKEKIEAPNKSHIDGAEFWRSNPSILAVQRSAMLRKQQLQQQQQQQQQQQ
QRQSSSNSGSDEDSSSDESDSSSGSKRRKNSGSSDSGSGSGSGSGSGSDSSAEENSDETA
SDYEPSHKIKSRKPPTKMNYRNGKKSSTQKKKNKKGSSSEDEDENYKKVASAGPRRQATV
NVSYKEDEELKTDSDDVVEVLGEDVPQPEEDEFETLERVMDSRIGRKRATGSVTTVYAVE
ADGDPNLTFDPNKEAGEVQYYIKWKNWAHIHNTWETEDTLKLQNVKGMKKLDNFKKKDQE
KKKWLKAASPEDIEYFNCQEELMDDLHSQYRLVERIIGHSNQKSAAGYPDYLCKWQGLSY
SEVSWEDGGLIGKKFQKCIDDYMNRNQSKTIPSRDCKVLKQRPRFVPMKKQPSYIGGEGL
ELRDYQLDSLNWMAHSWCKGHSCILADEMGLGKTIQTISFLNYLFNEHQLYGPFLLVVPL
STLTSWQREIQLWAPQMNVVVYLGDISSRNMIRTHEWMHVHSKRLKFNIILTTYEILLKD
KSFLGSVNWAFIGVDEAHRLKNDDSLLYKTMMDFKSNHRLLITGTPLQNSLKELWSLLHF
IMPEKFHSWELFEEDHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMS
AIQKQYYKWILTRNYKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKPPEDNEFFNRMEA
LQHLIRSSGKLVLLDKLLLRLKERGHRVLIFSQMVRMLDILADYLRSRQFLFQRLDGSIK
GEMRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAH
RIGQKRQVNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQRMDTTGKTVLHTGAAPSSSAP
FNKEELTAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENDPGPSTVGEELLSQF
KVANFSVMEDEEIDMDSERSHHSWEAIIPEEQRRRLEEEERQKELEEIYLLPRMRNCAKQ
ISFNSGGRQSRNRRYSGSDSDSPSDRKRPKKRGRPRTIPRENIKGFSDAEIRRFVKSYKK
FGGPLERLDAIARDAELVDKSEHDLKRLAETVHNGCVRTLRENPCGPDKTSGGRRGKVKG
PTFRISGVQVNAKLVISHEEELAPLHKAIPADPEERKKYMIPCHSKAAHFDIDWGKEDDS
SLLIGIYEYGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKDLAK
KEAQKQAGTANSRKRKPRSKKSKTLKPTKTDEVIKSPSSDPPSDKGSDDDEDDDDDDIKV
EKETPPVKPPSRPSRADRVVVKEEDDDDEDEEEEEEPEQEEVSSSGEREIKEKEIKKEGK
KEKKEESWDIKETKEPKEKKEAKPVEAVNKQEENADKNEVKTEAREWTKKASDVPVHITA
SGENVPISEESEELDQRTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIG
DHITECLKEYSNPEQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQENAQAMEQNT
RSLSTHGYKHADAERLKDNSHQDESSRDSYSSERHQSTGRYHENSGGKERHITDSHRKTA
GGESRKRPYPSFSNGKDHRDRDHYRPDSRDRDRDRDRDRDRDRQDRYYNDSKHRKLEDFR
SSRDHRLDVKEYSHSDQRSTYRYHSDWQNEQRASASGPRSPRDQRSPYDARSPMGHRSPF
DYSSDHKSTPEQIWSSRKT
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
atggctggacgcagtgaaaatgaaagtgtcagcaatagcagtggagaatcaagcaattca
gatgatgaatccggttctggatcgggctccgcatcagggtcaggctcaggctccagttct
agttcctccagcagcagcagccaatcagggagcagtgactcaggaagtggttcagactcc
ggcagccagtcagactctgatgccgaaaaatccaaggagaagattgaagcaccaaataaa
tcacacatcgatggagctgagttctggaggtccaacccaagtattctggcagtgcagagg
tctgcaatgctccggaaacaacagcttcagcagcagcagcagcagcaacagcaacagcag
caaagacagagctcttcaaacagtggatctgatgaggactcatctagtgatgaatcagac
tcatctagtggatccaaaaggagaaaaaattcaggttcctctgattctggatcgggttct
gggtctggaagtggttctggatcagactcatcagccgaggaaaacagcgatgaaacggca
tcagactatgagcccagtcacaaaatcaaaagcagaaaacctccaaccaagatgaattat
agaaatggtaagaaaagcagcacccagaagaagaaaaacaagaagggctcgtcttctgaa
gatgaggatgaaaactacaagaaggtggcatctgcggggccacggcggcaggccacggtc
aatgtcagctacaaggaagatgaggagctgaagacagactcggatgatgttgtggaagtt
ctgggtgaagatgtcccacagcctgaggaagatgagtttgaaacacttgaaagagtgatg
gacagcaggataggaaggaaaagagcaacaggaagtgtgaccactgtatatgctgtagaa
gcagacggggatcccaatttgacctttgacccaaacaaagaggctggtgaggtccagtat
tatataaagtggaagaactgggcccacatccacaacacgtgggagacagaggacacgctg
aagttgcagaatgtcaagggcatgaagaaactggacaatttcaagaagaaagaccaggag
aagaagaaatggttaaaggcagcttcaccagaggacatagaatatttcaattgtcaggag
gagttgatggatgaccttcattcccagtacagattagtggagcgaatcataggccattca
aaccagaagtcagcggctggttatccagactacctgtgcaagtggcagggtttatcatac
tcggaggttagctgggaagatggtggtttgattggcaaaaagttccagaaatgcatcgac
gattacatgaaccgaaaccagtcaaagaccattccttctagagattgcaaggtgctcaaa
cagagacccaggtttgtacccatgaagaaacagccatcgtacattggaggtgagggactg
gagctgcgagactaccaactggacagtttaaactggatggcccactcctggtgcaaagga
cacagttgtatccttgctgatgaaatgggtttaggaaagactatccagaccatctccttc
ctcaactacctgttcaacgagcatcagctgtatgggcccttcttgctggttgtgcctctt
tctacactgacctcttggcagagagaaatccaactctgggcccctcaaatgaatgttgtg
gtgtacctgggagacatcagcagcaggaacatgatcaggactcatgagtggatgcatgtt
cacagcaagagactgaaatttaacatcatcctcacaacgtatgagattcttctaaaagat
aagtcatttttgggcagtgttaactgggccttcattggtgtggatgaggcacaccgactg
aagaacgatgattccctcctctacaaaaccatgatggacttcaagtccaatcacaggctt
ctgatcacaggaacaccactgcagaactcgctgaaagaactctggtccctgctgcacttc
atcatgcccgagaagtttcactcttgggagctgtttgaggaggaccatggtaaaggtaga
gattcgggctacaccagtctgcacaaagaactggaaccttttcttctgcgcagagtcaag
aaggatgtagagaaatcacttcctgccaaagtggagcagattctcagagtggagatgagt
gctatccagaaacagtattacaaatggatcctgaccaggaactacaaggctttgagtaaa
ggtaccaaaggcagtacttcaggtttcctgaacatcatgatggagctgaagaagtgctgt
aaccactgttaccttatcaagcctccagaggacaatgagttcttcaacagaatggaagcc
ttacagcacctaatccgcagcagtgggaagttggttctgttggacaaacttctgctgcgt
ttgaaggagcgaggccacagagttctcattttctcccagatggtacggatgctggatatc
ctggctgattatctgaggagcagacaattcctttttcagagattagacggttcaatcaag
ggagagatgaggaagcaggcgttggaccactttaatgcggagggctcagaggatttctgc
ttcttgctttcgacacgtgcgggtggtctgggtatcaatctggcatcggctgacactgta
gtcatctttgactctgactggaatcctcagaatgatctgcaggcccaggccagagcccac
agaattggacagaagagacaggtgaatatctaccgtcttgtgacaaagggatcagtcgaa
gaggacattattgagagggcgaagaagaaaatggtgctggaccacctggtcattcagagg
atggacaccactgggaaaactgtccttcatactggtgctgctccctccagttcagcacct
ttcaataaggaggagcttactgccatcctgaagtttggtgctgaggagcttttcaaagag
ccagagggagaagagcaggagcctcaggaaatggacattgacgagatcctgaaaagagcg
gagaccagagagaatgaccctggaccctccacggttggagaagagcttctgtctcagttc
aaggtagccaacttctctgtaatggaggatgaggaaatagacatggattctgagcgcagt
catcatagttgggaggctattattcctgaggagcagaggaggaggttggaggaagaggag
agacagaaggagcttgaagaaatctacttgctaccacgtatgaggaattgtgccaaacag
ataagctttaattctgggggccgacaaagcagaaacaggagatactctggttctgacagt
gattcaccctcagaccgaaagaggccaaagaaacgagggcggcccaggaccataccacga
gagaatatcaagggtttcagcgatgccgagatccggaggtttgtgaagagttacaaaaag
tttggtggaccactggaaaggttggatgcaattgctcgtgatgctgaacttgtagataag
tctgaacatgacctgaaacgcttggcagaaactgttcataatggctgcgtgagaacacta
cgagaaaacccctgtggaccagacaaaacctcaggaggcaggcgagggaaggtaaaaggc
ccgacatttaggatctctggagtccaggtgaacgccaaacttgttatctctcatgaggaa
gagctggctccactccacaaggccattcctgctgaccccgaggagagaaaaaagtacatg
attccatgccattcaaaggcagcacactttgacattgattgggggaaggaagatgactct
agcctcctcataggaatctatgagtacggttatggcagctgggaaatgatcaagatggac
ccggacctcaatctcacacacaagctcctaccagatgaccctgacaagaagccacaggcc
aaacagctacagacgagagcagactacctcatcaagttactgagcaaggacctggccaaa
aaagaagcacagaaacaagcagggacagctaattcacggaagaggaaaccaagaagtaag
aaaagcaaaactctgaagccaacaaagacggacgaagtaataaagagtccttcctcagat
cccccatcggacaagggctcagatgatgatgaggatgacgatgatgatgacatcaaggtg
gaaaaggagacgccgccggtgaagcctccgagcagaccgagccgagcagacagggtggtg
gtgaaggaagaggacgatgatgacgaggacgaggaggaggaagaggagcctgagcaggag
gaggtttcttcatcgggggagagggagatcaaagagaaagaaatcaaaaaagaaggcaaa
aaggaaaagaaggaggaaagttgggacattaaagagacaaaggaaccaaaagagaaaaaa
gaagcaaagcctgtggaggccgtgaacaaacaagaggagaatgctgacaagaatgaggta
aaaactgaggcacgagaatggacaaagaaagcctctgatgttccagtgcacataacagca
agtggagagaatgtgcccatatctgaggagtcggaggagctggaccagaggaccttcagt
gtgtgtaaagagaggatgcggccggtgaaagcagccctgaagcagctggacaggccggag
aaagggctgtcggagcgcgagcaactggaacacacgagacagtgcctcatcaagatcggg
gaccacatcaccgagtgtctgaaggaatattccaatcctgagcagatcaaacaatggaga
aaaaacctgtggatatttgtttccaaattcaccgagtttgacgccaggaaactacataaa
ctttataagcatgcaatcaaaaaaagacaagagaatgcccaggcgatggaacagaacact
agaagtctaagtacccacggctataaacatgcagacgctgagcggctgaaggacaactcg
catcaggacgagagcagcagggacagctacagctcggaacggcaccagtctacgggtcga
taccatgagaacagcggcggcaaggagagacacatcaccgattcccacaggaagactgca
ggaggagagtcccggaaaagaccatatccctccttcagcaatggcaaagaccaccgagac
agagaccactacagaccagacagcagggacagggacagagatcgagatcgagacagagat
agagacagacaagacagatactacaatgacagcaagcacaggaagctggaggatttccgc
tccagcagagaccaccggctggacgtgaaggaatattcccactcagaccagcgctctact
taccgctaccactcagactggcaaaacgagcagcgagcctcggccagcggaccccgctct
ccccgagaccagcgctcgccgtacgacgcccgctcgcccatgggccaccgctcgcccttc
gactactcgtcggaccacaagagcacacccgagcagatctggagcagccgcaagacataa
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integrated database retrieval system
