Solea solea (common sole): 131446175
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Entry
131446175 CDS
T10853
Symbol
rc3h2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
ssoe Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssoe03000
]
131446175 (rc3h2)
04121 Ubiquitin system [BR:
ssoe04121
]
131446175 (rc3h2)
Transcription factors [BR:
ssoe03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
131446175 (rc3h2)
Ubiquitin system [BR:
ssoe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131446175 (rc3h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-CCCH
zf-RING_2
zf-CCCH_4
zf_CCCH_4
zf-CCCH_UNK
Prok-RING_4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_4
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
131446175
NCBI-ProteinID:
XP_058473235
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All DBs
Position
19:14207451..14235494
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AA seq
1158 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDSSGNQPISLGCSHTVCKTCLHKLHRKACPFDQTPISTD
IDLLPVNCALLQLVGAQVPDVQPVSLTCAAEVEHYEVCRLCVEELALYLKPISGAKGVAA
LSPSVLSRPMQRKLVTLVNCQLVEEEGRVRAVRAGRSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEDALKLVLLALEDGSALSRKVLVLFVVQKLEARFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLVHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLTSLRPHLELLANI
DHNPDAPAPSWEELESVMLAVKLVVHGLVEFIQNFSKKSHDTPQPQANSKYKTSMCRDLR
QQGGCPRGTNCTFAHTQDELEKFRLRNKKSSSVGRAFPLAPGVMGKTFTMEGSIHTDVTV
GMGSGLKGTAENTTALAEGVPGLTHPQLISRGADMMEEMKRAVPNGSSGANGSNGTSGTN
RTTAASTEQKPISPPRTPISHSSASSPLTTVGQGDGGAPMPKHGQFMLRAPHHSQASELF
YQHSDYDTAHYPPTSGSYYPSTLHPPHKPCMARFLRSSNVPESSLPPSMGPPPTSYASDP
QTPHPPSSSSSSVYPPHPPRDRMGPSFHPHPGQPQYGPLAPAHGVYAPLYDSRRVWRPQL
YHREDARSNSLPPEVLHSYQPPLRERFNSLDSNYCSAAEHRAALHRDYGRVPLGYEDLFR
RKQEQWAHHHHHHHHNTTRPSQSSPIFTIDFGSEHLESSGGQCVGCRFRGEESLAHYSPW
SCGSIGPCLSPFEPETLTHTSAHSCAEHSELDSNGGRGGGGGGGGVGSNSIGKRWLHSLD
HYRRMKDEDPIIPFSEGPIISKWGAISRASRTGYHTTDPVQATACQRSASTTPINFKDYN
PHLDHSDFRWSSRGSDSSSHSSFLESEQLCASELHGRRTSIGCGEKAVSDLKAHQTTYIQ
DQDLVESQSDPDRDIELELCALDMEDSDHQEIKSQELLDLVTPQSQDSSRLLPPPCSSPL
LSSPVEEHPQTEGPLTEKMDAHLLKKMAFRKSLSPGGLVSGGLGVGKLVLRTGPPQLGDT
STRACPETHGTEMLLNGS
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgcaggcggcccagtggaccgagttcctgtcctgtcccatctgctacaatgag
tttgacagcagcggcaaccagcccatcagcctgggctgctcgcacacggtgtgtaagacc
tgcctccacaaactgcaccgcaaagcctgcccctttgatcagacgcccatcagcacagat
atcgacctgctgccggtcaactgcgccctcctacagctggttggagctcaggttccagat
gtgcagcctgtgagcctgacttgtgccgcagaggtggagcactatgaggtgtgcaggctg
tgtgtagaagagctggctctctacctaaaacctatcagtggagcaaaaggtgtggcggct
ctgagtcccagtgtacttagtcggcctatgcaaaggaagctggtgactttggtgaactgc
cagctggtggaggaggagggccgtgtgcgggcggtgagggcaggccgctcgctgggggag
cgaactgtgaccgagctcattctgcagcatcagaacccacagcagctctctgccaacctg
tgggcagcagtgagggcacgggggtgtcagttcctgggacctgctatgcaagaagatgcg
ctgaagctggttctactcgctctggaggacgggtcagctctctccaggaaggtgttggtt
ctgttcgtagtccagaagctggaagcccggttcccacaggcctccaaaaccagcataggc
catgtggtgcagctcctctacagggcctcctgcttcaaggtgactaagcgcgacgaggac
tcttcactgatgcagctgaaggaagagttccgtacgtacgaggctctcaggagggaacac
gacgcccagatcgtccacatcgccatggaggcgggcctgcggatctcgccggagcagtgg
tcgtcgctgctgtatggcgacctggtgcataagtcacacatgcagtccatcattgacaag
ttgcagtctccagagtctttcgcgaagagcgttcaggaactgacaatcgttctgcagagg
acgggagacccggccaacctcaccagcctcagaccgcacttagagctgctcgccaacatt
gaccacaatccagatgccccagcaccatcatgggaggagctggaaagtgtgatgctggct
gtgaagctggtggtgcacggactggtggaattcatacagaacttcagcaagaagagccac
gacactccacagcctcaggccaacagcaagtataagacaagcatgtgccgagaccttcgt
caacagggcggctgtccccgaggaaccaactgcactttcgcacacacacaggatgagctg
gagaaatttagactgaggaacaagaagagcagcagcgtgggccgagcatttccgttggca
cccggggtgatgggtaaaacgttcaccatggagggcagcattcacacagatgtgacggtg
ggaatggggtcggggctcaaaggcacagcggagaatacaaccgccctggcagagggagtt
cctggcctgactcacccccagctcatctccagaggggcagacatgatggaggaaatgaag
agagctgtgccaaatggatccagcggggccaacgggtctaacgggacatctggcaccaac
cgaaccacagcggcgtccacagaacagaagcccatctctcctcccaggactcccatcagc
cactcctcagcatcatctcccctgaccacagttggacagggtgatggtggtgctcctatg
cccaaacatggtcagttcatgctgcgcgcaccgcatcattcgcaggcatcggagctgttc
tatcagcactctgactatgacacggcccattatccgccaacctcaggttcttattatcca
tccactctccaccctcctcacaaaccctgcatggctcgcttcctcagatcatccaacgtc
ccagaatcctctctgccaccttccatgggcccgccaccgacttcctatgccagtgatcct
caaacaccacacccgccctcgtcctcttcctcctcagtgtacccaccacacccgcctcga
gatcgaatgggtcccagcttccatccgcacccgggacagcctcagtacggacctctggca
ccagctcacggggtctatgctcctctgtatgacagcagaagagtatggaggcctcagctg
taccacagagaggatgccaggagtaactcactgcctccagaggtgctgcattcctaccag
cctccactcagggagagattcaactctctagacagcaactactgctctgcggcggagcac
cgtgcagcgctgcacagggattacggtcgtgttcctctaggctacgaggatctgttcagg
aggaagcaggaacagtgggcgcaccatcatcatcatcaccatcacaacaccaccagaccc
tcacagtcctcccccatcttcacaatcgattttggatccgagcatctggagagcagcgga
ggtcagtgtgtcggctgcaggttcagaggcgaggaaagcttagcgcactactccccgtgg
tcctgtggaagcatcggcccctgcctcagtccctttgagcccgaaacactcacgcacact
tccgctcactcctgcgccgagcactcggagttggacagtaacggcggcagaggaggagga
ggcggcggcggcggcgttggcagtaatagtattgggaagcggtggctgcattcgctcgac
cactaccgccgcatgaaagacgaggatccgatcattcccttcagtgaggggcccattatc
tccaagtggggcgctatatccagggcgtcacgcacgggctaccacaccactgacccggtc
caagccactgcctgccagagaagtgccagcaccacacccatcaactttaaagattacaac
ccacacttggatcacagtgacttcaggtggagctccagaggatccgactcctccagtcac
tccagtttcctagagagtgagcagctttgtgcatcagagcttcacggccgtcgcacttcc
ataggctgcggagagaaagctgtctctgatctgaaagcccatcagaccacctacatccag
gatcaggatctggtcgagagccaatcagacccagaccgagacattgagctcgagctgtgc
gctctggacatggaggattcagaccaccaggagatcaaatctcaggagcttttagacctg
gttactccacagtctcaggattcttcccgcctccttccacctccctgctcctcccccctc
ctctcatccccggtagaggagcatcctcaaacagagggccctttgacagagaagatggat
gctcatctgctgaaaaagatggctttcagaaagtccctgtcccctggaggcttggtctca
gggggtctgggcgtcggtaagctggtgctgcggactggaccgcctcaactgggggacact
tccacccgggcttgtccagagacccacggaacagagatgctgctcaacggaagctaa
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