Solea solea (common sole): 131446617
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Entry
131446617 CDS
T10853
Symbol
whrna
Name
(RefSeq) whirlin isoform X1
KO
K21879
whirlin
Organism
ssoe Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssoe03037
]
131446617 (whrna)
Cilium and associated proteins [BR:
ssoe03037
]
Primary cilia and associated proteins
USH complex and associated proteins
131446617 (whrna)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
USH1C_N
DUF6288
HHD_RTEL1
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
131446617
NCBI-ProteinID:
XP_058473966
LinkDB
All DBs
Position
19:complement(20339263..20447161)
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AA seq
971 aa
AA seq
DB search
MSSTDLERVSLSSSANSVASSSARTLSANVRKLHNALNLLLNDFEREQFIHCLNVYHSKR
NVYDLVQTLHVILNAPSKRQLLPMLRLVIPRSDQLLFEQYTSEGLYLKSDLVATSNGSAE
PAAGLDFPRSASPTPPAAHLSPSGAAPELQVALRGSPDSFSTSSDGTAPLVPLLGRNFIH
EPPGALRQVNMKRHKSNEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRIGDQIMKVN
DKVFDKVTHAEAVKVLKGSKKLCLSVRSVGRIPGGYVTNHVYTWVDPQGRSVSPPPDLPE
QRSATLKRSDSQRRSNMQLLQEGDEKKVNLVLDDGRSLGLMIRGGAEYALGIYITGVDQG
SAAECGGLKVGDQILEVNGCSFLSVPHDDAVRVLKSSRHLMMTVKDVGRVPHARTVVGET
KWIASSQIAESSANSSVEGFPEEQGASAAGKPGFYKGVAGSQVTLSSLVNQSRAMLEEKA
RHLLTEAERQTMGYYVEEYRDGHIGAEQLVMALFELLNTHAKFSLLSEVRGLVTPQDLEC
FDGMVLRREIQALKARQGKAGAAAMQPDSLSMVSYPDTLTSSSASFMTNTTLSSARNDSV
VESNGEDPPESLNTLLTDISLDDIQSAATAEPPPSFKPPPPPGVQRRQSRQELRNKSESS
HSGLYFTAPPSHGHSREAARAAAPPPPAPAQHHKRQHPRDPAASQDYTAVRKRDLSKKEQ
IKAAQLSKVAAHNIGPFPRVQSPSRGPKPAAPSPSPPPPPPLPAPQPPPTLPLKSASLSK
ASPASKAQFVTVEVHRPNAEPDVNEVRPLPQARGGALSQLSDSGQTLSEDSGVDIAESAH
VSKDSSPHSSRTRLPPRDTQGGGGDKPSKPPGLLEPTSALVRVAKSATTLGIAIEGGANT
RQPLPRIVTIQRGGSAHNCGQLKVGQVILEVNGVSLRGREHREAARIIAEAFKTKERDHV
DFLVTEFNVAL
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaccgacctggagcgcgtgtcgctcagctcctccgccaactccgtggcctcg
tccagcgcgcgcacgctgtcggctaacgtgcgcaagctgcacaacgcgctcaacctgctg
ctcaacgacttcgagcgcgagcagttcatccactgtctcaacgtctaccactccaagcgc
aacgtctacgacctcgtgcagacgctccacgtcatcctgaacgcgcccagcaagcggcag
ctgctgccgatgctgcggctcgtcatcccgcgctcggaccagctgctcttcgagcagtac
acgtcggagggactctacctcaagtcggatttagtcgcgacgagcaacggcagcgcggag
cccgcggcgggactcgacttcccccgcagcgcgagcccgactccccccgccgcgcacctg
tcgccctccggagccgcgccggagctgcaggtggcgctgcgcggctccccggacagtttc
agcaccagcagcgacgggacagctccgctggtgccgctgctcggcaggaacttcatccac
gagccgccgggggcgctgcgccaggtcaacatgaagcggcacaagagcaacgagggcctg
ggcttcagcatccgcgggggctcggagcacggcgtgggcatctacgtgtccctggtggag
cccgggagtctggcggagaaggaggggctgcgcatcggagaccagatcatgaaagtcaac
gacaaagtgtttgataaagtcacgcacgcggaggctgtcaaggtgctgaagggcagtaaa
aagctctgcctctccgtgcgctcggtcgggcggattcccggcggatatgtcaccaaccat
gtttacacgtgggtggaccctcagggtcgcagtgtgtcgccacctcctgacctgccggag
cagcgcagcgccacgctgaagaggagcgacagccagcgacgcagcaacatgcagctcctg
caggagggagacgagaagaaggtcaacctggtcctggacgacggccgctctctcgggctg
atgatccggggcggagcggaatacgctttggggatttacatcactggagtggaccagggg
tcggcggcagagtgtggcggactcaaggtgggcgaccagatcctggaggtgaacggctgc
agcttcctgagcgtgccgcacgacgacgccgtccgcgtgctgaagtcgtcgcggcacctg
atgatgacggtgaaggacgtggggcgggtgccgcacgccaggacggtggtcggcgagacc
aagtggatcgccagctcgcagatcgccgagagctcggccaacagcagcgtggagggcttc
ccagaagaacaaggagcgtctgcagcaggaaagccgggcttttataaaggcgtcgcgggc
tcacaggtgactctgtccagcctggtgaaccagtcacgggccatgctggaggagaaggca
cgccacctgctgacggaggccgagcggcagaccatgggctactacgtggaggaataccgg
gacggacacatcggggcggagcagctggtcatggcgctgttcgagctgctcaacacgcac
gctaaattctctctgctgtccgaggtccgaggcctggtcaccccacaggacctggagtgt
tttgacgggatggtgctgcggcgggagattcaggccctgaaggctcgtcagggcaaagcc
ggagccgccgccatgcagccggactccctgtccatggtgtcctaccctgacaccctgacc
tcgtcgtcagccagcttcatgaccaacaccaccctcagctctgcgcggaacgacagcgtg
gtggagagtaatggagaggatcctccggagagtctgaacacgctgctgactgacatctct
ctggatgatatacagtccgccgccaccgccgagccccctccctccttcaagcccccgccc
cctcccggggtgcagaggcgccaaagtagacaagagctgcgcaacaaaagcgaatcctcc
cactcaggcttgtacttcacggccccgccttcccacggccacagcagagaggcggcgcgc
gccgcagccccgcccccacctgcacccgcacaacaccacaaacgacaacaccccagggac
ccggcggcgtctcaggactacacggccgtcagaaagagagatctttccaagaaagagcaa
attaaagccgctcagttgtccaaggtcgccgcgcacaacatcggcccgtttcccagagtc
cagtcccccagcagaggccccaaacccgccgccccgtccccgtcaccaccgccgccacct
ccactccctgctccccagcctcccccgactctgcccctaaagtcagcgtccctgtccaaa
gcctcccccgcgtctaaagcacagttcgtcacagtggaggttcacaggccaaacgcagag
cccgacgtcaacgaggtgcggccgctgccacaggcccgaggtggcgccctgtctcagctg
tcagacagcggccagaccctcagtgaggacagtggcgtggacattgctgagtcagcacac
gtcagcaaagacagcagcccccattcctcacgcactcgcctccccccacgagacacccag
ggaggcgggggggacaagccctccaaaccgccaggtttgttggagcccacctctgcacta
gtgcgggtggcaaagagcgccaccaccctgggtatcgccattgaaggaggagccaacact
cgccagccgctgccaagaattgtcacaatacagagaggcggctcggctcataactgcggc
cagctgaaagtgggtcaggtgatcctggaggtgaacggggtttccctgaggggccgcgag
cacagggaggcggcgcgcatcatcgctgaggccttcaagaccaaagagagggaccacgtg
gacttcctggtgaccgagttcaacgtggcgctatag
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