Solea solea (common sole): 131446630
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Entry
131446630 CDS
T10853
Symbol
ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ssoe Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssoe03009
]
131446630 (ddx55)
Enzymes [BR:
ssoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131446630 (ddx55)
Ribosome biogenesis [BR:
ssoe03009
]
Eukaryotic type
Pre-60S particles
Helicases
131446630 (ddx55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
SBF_like
Helicase_C_2
Cas3-like_C_2
YbjM
Motif
Other DBs
NCBI-GeneID:
131446630
NCBI-ProteinID:
XP_058473987
LinkDB
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Position
19:3339082..3345371
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AA seq
596 aa
AA seq
DB search
MDNTTEGTWDRLPVKLNEGVYQTLEELKFTHMTPVQSACIPLFLNNKDVAAEAVTGSGKT
LAFVIPIIELLLKREEKLKKMQVGALVITPTRELALQISEVMGQFIQKFPQFTQILLIGG
SNPIEDVEKFKNQGANILIATPGRLEDMFRRKPDGLDLGSSVRSLDVLVLDEADRLLEMG
FEASLNTILGYLPKQRRTGLFSATQTQELEKLVRAGLRNPVRITVKEKGVAATATQKTPS
RLSNYYTMCRSEDKFNNLVAFLRQHKHEKQLVFFSTCACVDYYGRALETLIKKVTVSLIH
GKMKNNRNKIFADFRSLKSGILVCTDVMARGIDIPDVNWVLQYDPPSSARAFVHRCGRTA
RIGNQGNALVFLLPMEESYVNFLSINQKCPLQKMPSIADVVDVLPKVKAMSLADRAMFDR
SMRAFVSYVQAYAKHECSLIFRIKDLDFASLARGFGLLRMPKMPELRRKTFPNFIGTTVD
TETIRYKDKHREKQRQKMLKEREEADPQPRKHFVRNKSWSKQKTRKERKRKRITKRKQDE
DSGTDDEDMTELLNDTRLLKKLKKGHISAEDFDKQIVKSEHKTEAPSIDCAIQEDV
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggacaacacgacagaagggacatgggaccgtttacccgtaaagcttaacgaaggggtt
tatcagacactggaggagctgaagttcacacatatgactcctgtacagtccgcgtgcatc
ccgctgtttttgaacaacaaagatgtggctgctgaggcggtgacgggcagtggaaagacg
ctcgctttcgtcatccctatcatagaactgctcctgaagagagaagaaaaactgaagaag
atgcaggttggggccctggtgatcactcccacaagagaattggcccttcagatcagtgaa
gtgatggggcagttcattcaaaagtttccacagttcacgcagattttactgattggtggc
tctaacccaatagaagatgtggagaagttcaagaatcaaggagcaaacattctgattgcg
acacctggccgcctagaggacatgttcaggaggaagccggacggtttggacttgggcagc
tcggtcaggagtctggacgtgctcgtgcttgatgaggcagaccgactgttggaaatgggc
ttcgaggccagtctgaacaccatcctgggctacctgcccaaacagaggcggaccgggctg
ttctcagccactcagacacaggagctggagaagctggtgagggccggcctcaggaatcct
gtgcggatcaccgtcaaagaaaaaggcgtggctgccaccgccacccagaagaccccgtca
cggctctccaactactacactatgtgtagatctgaggacaagttcaacaacctggtggca
tttctgaggcaacacaagcatgagaagcagctggtcttcttcagcacgtgtgcatgtgtg
gattactacggccgagctctggagacgctgatcaagaaggtgaccgtctctctcatccac
ggcaagatgaaaaacaatcgcaacaagatcttcgccgacttccggagcctaaaaagtggg
atcctagtgtgcactgacgtcatggccaggggcatcgacatccctgacgttaactgggtg
ctgcagtatgatcctcccagcagtgcccgtgcgtttgtccatcgctgcggtcgtacagca
cgtattggtaaccagggaaacgccctcgtctttctgctgccaatggaggagtcgtatgtc
aatttcttgtccatcaaccagaaatgccctctccagaagatgccctctatcgctgacgtt
gtagacgtgctgcccaaagtgaaggccatgtctctagcagaccgcgccatgtttgaccgg
agcatgagggccttcgtctcctacgtgcaggcgtatgccaaacacgaatgtagtctcatc
tttagaatcaaagatctggactttgcctccttagcccgtggctttggcctccttcgcatg
cccaagatgcccgaactgagaaggaaaacgttccccaatttcattgggacgacggtggac
acggaaaccatccgctacaaggacaaacaccgagagaaacagagacagaagatgctgaaa
gagagagaggaggcggatcctcagcccaggaagcatttcgttaggaacaagtcctggtcc
aaacagaagaccaggaaggaacgtaagagaaagaggataaccaagaggaaacaagacgag
gactctggcacggacgatgaagacatgacggagcttttaaatgacactcgtctcctcaag
aaactgaagaaaggccacatcagtgcagaggactttgacaaacagatcgtgaagtcggaa
cacaaaacagaggcaccgtcaatcgactgcgcgatccaagaggatgtttga
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