KEGG   Solea solea (common sole): 131447153
Entry
131447153         CDS       T10853                                 
Symbol
hdac1
Name
(RefSeq) histone deacetylase 1 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
ssoe  Solea solea (common sole)
Pathway
ssoe03082  ATP-dependent chromatin remodeling
ssoe03083  Polycomb repressive complex
ssoe04110  Cell cycle
ssoe04330  Notch signaling pathway
ssoe04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:ssoe00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    131447153 (hdac1)
   03083 Polycomb repressive complex
    131447153 (hdac1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    131447153 (hdac1)
   04350 TGF-beta signaling pathway
    131447153 (hdac1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    131447153 (hdac1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ssoe03036]
    131447153 (hdac1)
Enzymes [BR:ssoe01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     131447153 (hdac1)
Chromosome and associated proteins [BR:ssoe03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     131447153 (hdac1)
   HDAC complexes
    Sin3A-HDAC complex
     131447153 (hdac1)
    BRAF-HDAC complex
     131447153 (hdac1)
    REST complex
     131447153 (hdac1)
    SHIP complex
     131447153 (hdac1)
    MiDAC complex
     131447153 (hdac1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     131447153 (hdac1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    131447153 (hdac1)
  Chromatin remodeling factors
   NuRD complex
    131447153 (hdac1)
SSDB
Motif
Pfam: Hist_deacetyl Glypican RNA_polI_A34
Other DBs
NCBI-GeneID: 131447153
NCBI-ProteinID: XP_058474642
LinkDB
Position
20:complement(3568109..3573359)
AA seq 481 aa
MALAQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAS
GEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAG
AVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPIIAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYVKSFNLPLLMLGG
GGYTIRNVARCWTYETSVALDSSIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMHAIPEDAPHPDSGEEDEEDPDKRVSIRAHDKRIACEEEF
SDSEDEAEGQGGGRRNAANHKKAKRVKKEEEKEGEEKKEVKEEEKEEEKMDTSGPKEEVK
T
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggcgctggctcaaggaacaaagaaaaaagtttgctattactacgatggtgatgtgggg
aactattactatggacagggccatcccatgaaaccccacaggatccgtatgactcacaac
ctgcttctcaactacggactttacaggaaaatggagatctatcggccacacaaagccagt
ggtgaagagatgacaaaataccacagcgacgactacattaagttcctgaggtcgatccga
ccggacaacatgtccgagtacagcaaacagatgcaaagattcaatgtcggagaggactgc
ccagtgtttgatggcctgtttgagttttgtcagctgtcaacaggtggctctgtcgctgga
gcagtgaaactgaacaagcagcagacggatatcgccatcaactgggccggtggactccat
cacgccaagaagtctgaggcctctggtttctgctacgtcaatgacattgtcctggccatc
cttgagctgctcaagtaccaccagagagtgctatacgtcgacattgacatccatcatggt
gatggggtggaggaggcgttctacaccacagacagagtcatgactgtctcattccacaaa
tatggagagtacttccctggcactggagacctgagggacattggcgcaggaaagggcaaa
tactacgcagtaaactacccactcagagatggtattgatgacgagtcctatgaagccatc
ttcaaaccaatcatagctaaagtcatggagatgtaccagccaagtgctgtggtcctccag
tgtggtgctgattctctttctggagacagactcggctgcttcaacctcaccatcaaaggc
catgccaaatgtgtcgagtacgtcaaaagtttcaacctgcctctgctgatgctgggcggt
ggcggctacaccatccgcaatgtggcccggtgctggacatatgaaacgtctgtcgccttg
gacagctccatccccaacgagctgccttacaatgactactttgaatactttgggcccgac
ttcaaactgcacatcagcccgtccaacatgaccaaccagaacaccaacgaatacctggag
aagatcaagcagcggctgtttgaaaacctgcgtatgctgcctcacgcccctggtgtacag
atgcatgcgatcccagaggacgccccccatccagacagcggagaagaggacgaggaggac
cccgacaaacgtgtctctatccgtgcccacgacaagaggatagcctgcgaggaggaattc
tccgactctgaggacgaggcagaggggcagggaggaggccgcaggaacgcagccaaccac
aagaaggccaaacgagtgaaaaaggaagaagagaaggaaggagaggaaaagaaagaagtg
aaagaggaggagaaggaggaagagaagatggacacatcaggaccaaaagaagaggtgaag
acctga

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