Solea solea (common sole): 131447408
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Entry
131447408 CDS
T10853
Symbol
snx27a
Name
(RefSeq) sorting nexin-27a
KO
K17936
sorting nexin-27
Organism
ssoe Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssoe04131
]
131447408 (snx27a)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssoe04990
]
131447408 (snx27a)
Membrane trafficking [BR:
ssoe04131
]
Protein recycling
Others
Others
131447408 (snx27a)
Domain-containing proteins not elsewhere classified [BR:
ssoe04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
131447408 (snx27a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
RA
SNX17-27-31_F1_FERM
RA_2
VirE3
PDZ_2
SNX17_FERM_C
SNX17-31_F2_FERM
USP7_C2
DarA_N
Motif
Other DBs
NCBI-GeneID:
131447408
NCBI-ProteinID:
XP_058475151
LinkDB
All DBs
Position
20:complement(16575927..16587856)
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AA seq
563 aa
AA seq
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MADVGDDETRPAVPSTSRNGPAVGSSTGIAGQNAAIVASGPRMVRIVKSESGYGFNVRGQ
VSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGIAKGDRILEVNGVSVEGATHKQVVDL
IRAGEKELVLAVLSVPAQEADGLEGGEDVQPNYDYSDKQAVPISVPTYKHVEQHSERFVV
YNVYMSGRQLCSKRYREFAILNQNLKREFSNFNFPKLPGKWPFSLSEQQLDARRRGLEEY
LERVCSVRVIGESDIMQEFLSESDENYNGVTDVELRIALPDKTTISVRVRKNSTTDQVYQ
ALVMKVGMDSIMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLALRKWLF
SFQEEELLRDNPLALHYCFHQALDDVKKGFIKTEDKSYQLQKLAEQRKMATYLSLLRTCE
GYNEVVFPHCSCDSRRKGHVITAISINHFKLHACTEDGTLENQVIAFEWGEMQRWDTDEE
GMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKQVEEEASDKDNKNCSNN
EFLPPLETQQKGWRHLGGEIATS
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtaggagacgatgaaactcggccggctgtcccttcgacatcccgtaatggt
ccggccgtcggctcgtcgacaggcatcgcgggccagaacgcagctatagtcgcgtcaggt
ccacggatggtgaggatcgttaagtcggagtctggatacgggttcaatgttcgcggtcaa
gtgagtgaaggtggacagctacggagcataaacggggaactgtacgctcctcttcagcat
gtcagcgctgtgttgcccggaggtgccgcggaccgagctggaattgcaaagggtgaccga
attctcgaagttaatggggtgagtgtggaaggtgccacccataagcaggttgtagacctg
atccgtgctggagaaaaggagctcgtcctggctgtgctttcagtcccagctcaggaggct
gatggattggaaggaggagaggatgtccaacccaactatgactacagtgacaagcaggcc
gtgcccatttcagttcccacatacaaacatgtagaacagcactcggagaggtttgtggtg
tacaatgtgtacatgtcgggtagacagctttgctctaagcgctacagagagtttgccatc
ctgaaccagaacctaaagagggagttttccaacttcaattttccaaagcttcctgggaaa
tggcccttctccctctctgaacagcaactggatgctcgtcgtagaggcctggaggaatat
cttgagagagtttgctctgtgcgggtaattggggagagtgacatcatgcaggagtttctc
tctgaatcagatgaaaattacaatggagtgacggacgtagagctgcgaatagccctgccc
gataagaccaccatctctgtcagagtccgcaagaatagcaccacagaccaggtgtatcag
gcattagtgatgaaggttggaatggacagtattatggcgagctactttgcactttttgaa
gtcatcaaccattcctttgtacgaaagctggcgcctaatgagtttccccacaagctttat
gtgcagaactacacgtcagcagtgccggggacttgcttggcgctccgcaaatggttgttt
agcttccaggaggaggagttactcagagacaatccgctggcgctgcattactgctttcac
caggcactggatgatgtgaagaagggattcataaaaacagaggacaaatcctaccagctg
cagaaactggcagagcaacgcaagatggccacgtacctgagcctgttgcggacatgtgaa
ggctacaatgaggtggtgtttcctcactgctcctgtgactccagaaggaagggacatgtc
atcacagccatcagcatcaatcacttcaagctacatgcttgcacggaggacggcacactg
gagaatcaggtgatcgcttttgagtggggagagatgcagcgctgggacaccgacgaggag
ggcatggctttctgcttcgagtacgctagaggagagaagaaacctcgctgggtcaaaatc
tttactccatattttaactacatgcacgagtgttttgagcgggtcttttgtgagctgaag
tggaggaaacaggttgaggaagaggcatctgacaaagacaacaaaaactgcagtaacaat
gagtttctgcctccattggagacacagcaaaaaggatggcgccacctagggggggagatt
gcaacgtcttaa
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