Solea solea (common sole): 131447484
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Entry
131447484 CDS
T10853
Symbol
rnf115b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ssoe Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssoe04131
]
131447484 (rnf115b)
04121 Ubiquitin system [BR:
ssoe04121
]
131447484 (rnf115b)
Enzymes [BR:
ssoe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131447484 (rnf115b)
Membrane trafficking [BR:
ssoe04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
131447484 (rnf115b)
Ubiquitin system [BR:
ssoe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131447484 (rnf115b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
Zn_ribbon_19
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
U-box_ZFPL1
C1_2
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
131447484
NCBI-ProteinID:
XP_058475280
LinkDB
All DBs
Position
20:16472020..16478356
Genome browser
AA seq
295 aa
AA seq
DB search
MAEAAEATQHRFFCHCCKRETNPKLPDLVCPRCDSGFIEEVTEESSLLQDSTSSASEDSD
SLFSELWQLLFMERSALLSHPPSSGSRPDDSQQVSAGQTGSFPLSQAAAEATEPESSPRP
EPERPSRPEQRPAVEGIVQQVLADIFANNGNPGAAPAALSSMLQLYANPADYAWGQGGLD
AVITELLGQLEGSGPPPAEKDMISSLPSVCISKEQKDCRLECPVCREEYSFGESVRKLPC
LHYFHSHCIVPWLELHDTCPVCRKSLDGVDNSLPSTAQPAGDRAIRAEQQERQAI
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcagaggcaacgcaacaccggtttttctgtcactgctgtaaacgtgaa
acaaaccctaagctcccggacctggtttgccccagatgtgactctggcttcattgaggag
gtgacagaagagtccagtctcctgcaggacagcacgtcatctgccagcgaagactcagac
tcattgttctcagaattatggcagctactgtttatggagcgctctgctctgctgtcccat
ccgccttcctcagggtcccgtccagatgacagccagcaggtgtctgcaggtcagaccggc
tcttttccgctgtcacaggctgctgctgaggccacagaaccagagtcttcaccccggcct
gagccggagaggccgtccaggcctgagcaaaggcctgcagtggaagggattgtacagcag
gtcttagctgacatcttcgccaacaacggaaaccctggtgctgcaccagctgcactatcc
agcatgttacagttatacgcaaacccagcagactatgcgtggggtcagggaggtctggat
gctgtcatcacagagttgttaggacagttggagggttcaggtccacctcctgcagaaaag
gacatgatctcatccctgccatcagtttgcatctctaaggaacaaaaagactgcagactg
gagtgtccagtttgtagggaggagtattcatttggggaatctgtcaggaaactaccttgt
ctccattacttccacagtcactgtatagtgccctggctggagctgcatgacacctgccca
gtgtgccgcaaaagccttgacggcgtcgataacagcctcccatccacagcacaacctgca
ggagatcgtgctatcagggcagagcaacaggagaggcaggcgatctga
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