Solea solea (common sole): 131447520
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Entry
131447520 CDS
T10853
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
ssoe Solea solea (common sole)
Brite
KEGG Orthology (KO) [BR:
ssoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssoe04131
]
131447520 (vps50)
Membrane trafficking [BR:
ssoe04131
]
Protein recycling
Others
EARP complex
131447520 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
131447520
NCBI-ProteinID:
XP_058475324
LinkDB
All DBs
Position
20:complement(12821177..12917443)
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AA seq
992 aa
AA seq
DB search
MQKIKSLMARQGLKSPQESMADLSPVENLRIPSKEELRELREQSIDPQAEQEIINSIEEV
YYSNDSFDMVQHELEKLPLELNLLELEEHRDKLKRQQAAVSKKVADLILEKQTAYVKELE
RVTALQTNLQLAAVICTNARRQLSVAKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITLDSYIPCLTDLCKALWEVMLSYYRTMQWHEEHDKQKNSPDDAA
AAADSDELVVDRSYVKKKLEHGLTRIWQDVQLKVKAYILGTDMSNFKYDDFIVVLDVISR
LMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSNFNIA
QLHEFKFMGQCRSPSMSPNRQAMLSNSPAQEELCLFQQFLQEGNPFEMHIEQKEEETEDV
LASNGYESDELEKSVYQEYDSDSDVPEELKQDYVDEQTGDAPLKSISRETIRSKKKSDYN
LNKINAPILTNTTLNVIRLVGKYMQMMSILKPIAFDVIHCVSQLFDYYLYAVYTFFGRND
MPVPSPSLPTHGGREAGTARVVGPACLYESSGLGLISSRLRTTLNRIQESLIDVEALGEN
AGVHGPAEDRKEKVPSPHLSQLVVLTNSGTLYGLAQRVVATESLVFLAEQFESLQSHLDT
MMPAAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLMMAGVKWDIREIMSQH
NVYVDVLLKEFEQFNKRLGDVSRHVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNE
GRALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQL
ANLVNVCLGSHINKRARQKLLAAIDDIDRPKR
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtctctcatggcccggcagggtctgaaaagtcctcaggagagcatg
gcagatcttagtcctgtagagaacctgaggatcccgagcaaggaggagttgcgggaactg
agggagcaatccattgacccccaggcagagcaggagatcatcaacagcatcgaggaggtc
tactactccaacgactctttcgacatggtgcagcacgaactggagaagcttccacttgag
ctgaatctgctggagctggaggagcatagagacaagctgaagagacaacaggcagcagtt
tctaaaaaggttgcagatcttattctggagaaacagactgcttatgtcaaggaactggaa
agagtgacagccttacagacgaacctacagctggcagccgtcatttgcactaacgcgagg
agacaacttagtgtggcgaaagagggattcacagaggccagcctgggtttactggccaat
cagagaaggcgtcaactgctgaccggcttgctcaagtctctgaggaccattaagacactg
caaagaaccgatgtaagactcagcgagatgctggaggaggaagattatccaggtgcaatc
cagctctgtctggaatgtcagaaagctgccagcacctttaaacactacagctgcatcagt
gaattgaattccaaactgcaagacactttggagcaaattgaggagcagcttgacgtcgcc
ctgtccaagacctgtaagcactttgatgtttcgcactacaccaaagtccagctggcctac
acactcctgggcaagacacagactgctatggaccaactacacatgcacttcacccaggcc
atccataacactgtgttccaagtagtgctgggatatgtggagctgtgtgccggcaatgct
gacaccaagttccagaagatgcaatataaggacctgtgcacgcatattaccttggacagc
tacatcccctgtctgacagatctgtgcaaggcattatgggaggtgatgctaagctactat
cgcaccatgcagtggcacgaagagcacgacaaacaaaagaattccccagatgatgcagca
gcagcagcagattctgatgagttggttgtggaccgcagttacgtgaagaagaaattggag
catggactgacgcggatctggcaggatgtccagttgaaagtgaaggcctacatcttgggg
acggacatgtccaacttcaaatatgatgattttatagtggtgctggatgtcatcagcagg
ttgatgcaggtgggcgaggagttctgtggcagcaagtctgaggtcctgcaggagtcgatc
aaacgccagagtgtcaactactttaaaaactatcacagggcacgtctggaagaactgagg
atgtttctggaaaatgagacgtgggaactttgtcctgtcaagtctaattttaacatcgcc
cagctccatgagttcaagttcatgggccagtgtcgctctccgtccatgtccccgaacaga
caggccatgttgtcgaactccccggcccaggaggagctgtgtctgttccaacagttcctt
caggagggaaacccgtttgagatgcacattgagcagaaagaggaggagacagaggacgtg
ctggcgtctaacggatatgagtcagacgagctggagaagagcgtgtatcaggaatacgac
agcgacagtgatgtccccgaggagctcaagcaggactacgtggatgagcagacgggcgac
gcccctctcaagagcatttcccgagagaccataagaagcaagaaaaagtctgactacaac
ctaaataaaatcaacgcaccgatcctcaccaacaccactctcaacgtcatccggcttgtt
ggaaagtacatgcagatgatgagcattctgaagccgatcgccttcgatgtcatccactgt
gtgtctcagctctttgactactacctatacgctgtatacaccttctttggacgcaatgac
atgcctgtcccaagcccgtctttgccaactcacggtggcagagaggcgggcactgccagg
gtggtgggccctgcttgcttgtacgagtcatcgggtctaggccttatcagcagccgatta
agaaccacactgaaccggatccaggagagcctcatagacgtggaagcactgggggagaac
gcaggtgtccacggcccagcggaggacaggaaggagaaggtgcccagcccacatctcagc
cagctggtggtcctcactaacagtggaactctttatgggttagctcagagagtggtggcc
actgagtctcttgtgtttttggcagaacagtttgagtccctccagtcccacctagacaca
atgatgcctgcggccaagaagcctttcctgcaacagttttattctcagacggtttctacg
gccagtgaactgcggaaacccatatactggatagtggccgccaaagccatcgactacgag
caaatgttactcatgatggctggagtgaaatgggacatcagggagataatgtcacagcac
aatgtgtatgtggacgtccttttaaaggagtttgagcaattcaacaagaggctgggtgat
gtttccagacatgtgcgcattccgctgcctgtgtccaacgtcttgtgggagcactgcatc
cgtctggccaacaggacgcttgtcgagggctacgccaatgtgaagaaatgtagcaatgag
ggccgggccctgatgcagctggacttccagcagttcctcatgaagctggaaaagctgacc
gacctgcggcccatccccgataaagagtttgtggagacctacatcaaggcttattacctg
acggagaacgacatggagcagttcatcaagaatcacagggagtattccatgaagcagctc
gccaacttggtcaacgtgtgcctgggctcacacataaacaagagagctcgacagaaactg
ctggcagccatcgatgacattgacagacccaagcgatag
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