| Entry |
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| Symbol |
sfpq
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| Name |
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
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| KO |
| K13219 | splicing factor, proline- and glutamine-rich |
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| Organism |
ssoe Solea solea (common sole)
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| Brite |
KEGG Orthology (KO) [BR:ssoe00001]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:ssoe01009]
131447564 (sfpq)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:ssoe03021]
131447564 (sfpq)
03041 Spliceosome [BR:ssoe03041]
131447564 (sfpq)
Protein phosphatases and associated proteins [BR:ssoe01009]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
131447564 (sfpq)
Transcription machinery [BR:ssoe03021]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
131447564 (sfpq)
Spliceosome [BR:ssoe03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
131447564 (sfpq)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
20:complement(7362507..7381079)
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| AA seq |
690 aa
MNRFNNNRGGFGMNHFQARRGGGPGGPMRGGLMGNPHFRTHPFQNNNQNRRGANNNFNKP
NNQGPQMTPPKPQQNQSQPIIPPPSPGPALTMKGPMQQQPKPVQPQQTQQEKPTTPTQPP
TIQSPPPKPAITPPLANQTNKNQNQNQQLKSPAGNTNGQQQTPQPSPKAAPQQDQKPIPQ
QTQKPIPQQAQKPIPQPAQKPVPQQAQKPGPQQGHRPGLQQSQKMGPQQGQRMGHQQGQR
MGPQHGQRAGQQAPKKDERNAPQENTGAMETDGGDSQGGFKATLSMLLKPGEKTYTQRCR
LFIGNLPNDITEELLKKMFAKYGEPSEVFVNKAKGFGFIRLESRALAEIAKAELDDTPMR
GRPLRVRFATHSAALSIKNLSPYVSNELLEEAFSQFGMVERAIVIVDDRGRSSGKGIVEF
ASKPAARKALDRCNEGIFLLSSSPRPVIVEPLEQFDDEDGLPEKLAQKNPRYQAEREEPP
RFARPGTFEFEYSKRWKSLDEMEKQQRQQVEKNMREAREKLESEMEDAYHEHQANLLRQD
LLRRQEELRRMEEMHSQEMQKRKEMQLRQEEERRRREEEMLRKREMEEQVRRQREENYRM
GNFMDRDREMRMNPGGALGMGDMPFNGSNQKFPMGFEGQQGMGPAAGGLMGNEMRNERFA
QGGPRGMGPGNPGYGRVREEFDGPTKKPRF |
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| NT seq |
2073 nt +upstreamnt +downstreamnt
atgaatcgattcaacaacaatcgcggtggattcgggatgaaccattttcaggcacgcaga
ggcggtgggcccggcggcccgatgcgcggtgggctaatgggaaatccacatttcaggacc
catccttttcaaaataacaaccagaatcggaggggggcgaataataactttaacaaaccg
aacaaccaagggccacagatgactcccccgaagccgcaacagaaccagtcacagcccatc
atccctccgccgagtcccggcccggctctcaccatgaaaggccccatgcagcagcagccg
aaaccagtacagccacaacagacacaacaggagaagccaacaaccccgacgcaaccgccg
acgattcagtccccaccaccgaaacccgccatcacccccccgctggccaaccagaccaac
aagaatcagaaccagaaccaacagctgaagtcgccggcaggaaatactaacggacagcag
cagaccccacagccgagcccgaaggccgcccctcagcaagaccagaagccgatccctcag
caaacccagaagccgatccctcagcaagcccagaagccgatccctcagccagcccagaag
ccggtccctcagcaagcccagaagccggggccccaacagggccacaggccgggtcttcag
cagagtcagaaaatggggccccaacaaggccagaggatgggccaccagcagggccagagg
atgggcccacaacatggacagagggccgggcaacaggcgccaaagaaagacgagcgaaat
gcgccgcaagaaaatacgggtgcaatggagaccgatggtggcgattcacagggaggattt
aaagcaacgttgtccatgctgctgaaaccaggtgagaagacctatacacagcgttgtcgc
ctgttcatcggtaatctgccaaatgacatcacagaggaactgttgaagaaaatgtttgcg
aagtatggagagccaagtgaggtctttgtcaacaaagccaaaggctttggtttcatccga
ctggaatcccgggcacttgcagagatagcaaaggcagagttggatgacacaccaatgaga
ggcagaccactgcgtgtccgatttgccacacattctgcagctctgtcaatcaagaacctg
tccccgtatgtctccaacgaacttctggaggaagcattctcgcagtttggaatggttgag
agggcgattgtgattgtagatgaccgtgggcgctcctcaggcaagggcattgtagagttt
gcctccaaacctgctgccaggaaggctctggaccggtgcaatgaaggcatcttcttactc
agttcatcaccccggcctgttattgttgagccacttgagcagtttgatgatgaagatggt
cttccagagaaactagcacagaagaaccccagatatcaagcagagcgtgaagaaccacct
cgctttgcacgtcctggcacttttgagtttgagtactcaaagaggtggaagtcgcttgat
gaaatggagaagcagcagaggcagcaggtggagaagaacatgcgcgaggcccgtgagaaa
cttgagagcgagatggaggatgcttaccacgagcaccaggccaatctgctccgacaagac
ttgctgaggagacaagaggaactacggcgcatggaggagatgcacagtcaggaaatgcag
aagaggaaagaaatgcagctcagacaagaggaagaaagacggcgacgagaggaggagatg
ttgcgtaagagggagatggaagaacaggtgcgtcgtcagcgagaggagaactacaggatg
ggcaacttcatggatagggacagggaaatgagaatgaatcccggtggagctttaggcatg
ggtgacatgcccttcaatggttccaaccagaagttcccaatgggcttcgagggacagcag
ggaatgggaccagccgctggaggcctgatgggcaacgaaatgcgcaatgagcgctttgcc
cagggtggtcctaggggaatgggtcctggtaaccccgggtacggcagggtccgcgaggaa
tttgatggtcccactaagaaaccccgtttttaa |
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